RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 HECTD3Q5T447 861 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 N4BP2L1Q5TBK1 243 aaPredicted RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 GRTP1Q5TC63 336 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 SETD3Q86TU7 594 aaPredicted RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 FIBCD1Q8N539 461 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 MFSD3Q96ES6 412 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 MYRFLQ96LU7 910 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 A0A087WXM4 84 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 ZCWPW2A0A1B0GU75 182 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 LOC105371267A0A1B0GV96 52 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 DYTNA2CJ06 578 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 J3QRK9 145 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 EFCAB14O75071 495 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 CHEK2O96017 543 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 CD247P20963 164 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TYK2P29597 1187 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 NUMBP49757 651 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TWF1Q12792 350 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 NAPEPLDQ6IQ20 393 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 STRA8Q7Z7C7 330 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 LGI2Q8N0V4 545 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 CFAP52Q8N1V2 620 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 ELMOD1Q8N336 334 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TMEM102Q8N9M5 508 aaPredicted RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 HPS1Q92902 700 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 FBXL8Q96CD0 374 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 ATXN7L3BQ96GX2 97 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 KLHL5Q96PQ7 755 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 AGAP2Q99490 1192 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 PKP2Q99959 881 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 IL22Q9GZX6 179 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 ZNF395Q9H8N7 513 aaPredicted RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 COPS7BQ9H9Q2 264 aaPredicted RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 CHRAC1Q9NRG0 131 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 SACM1LQ9NTJ5 587 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TRPM5Q9NZQ8 1165 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 MARCOQ9UEW3 520 aaPredicted RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 PTBP2Q9UKA9 531 aaKnown RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 POU2F3Q9UKI9 436 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TMA7Q9Y2S6 64 aaKnown RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 AAR2Q9Y312 384 aaKnown RBP15.35■□□□□ 0.05
PNKP-204ENST00000594661 CPQQ9Y646 472 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 A0A1W2PPW3 197 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 A0A1W2PQ67 120 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 MAGEB16A2A368 324 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 C2orf78A6NCI8 922 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 PRRG1O14668 218 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 TIMM44O43615 452 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ALOX5P09917 674 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 KITP10721 976 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 MYCLP1P12525 358 aaPredicted RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 MYL4P12829 197 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 IFITM2Q01629 132 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 CDH17Q12864 832 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 STXBP5Q5T5C0 1151 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 SIGIRRQ6IA17 410 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 C16orf59Q7L2K0 433 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 GET4Q7L5D6 327 aaPredicted RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 IPMKQ8NFU5 416 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 CALML6Q8TD86 181 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 PSMG2Q969U7 264 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 TBL1YQ9BQ87 522 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 RNF38Q9H0F5 515 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ANKMY1Q9P2S6 941 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 DCDC2Q9UHG0 476 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 BCAP29Q9UHQ4 241 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 EMCNQ9ULC0 261 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 PRPF19Q9UMS4 504 aaKnown RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 C7orf72A4D263 438 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 F5H5T6 163 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 TEX28O15482 410 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 PSMD3O43242 534 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ACSL4O60488 711 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 S100BP04271 92 aaPredicted RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 F7P08709 466 aaPredicted RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 LBX1P52954 281 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 MRPS22P82650 360 aaKnown RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 SLC10A7Q0GE19 358 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ITGADQ13349 1161 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 TAF12Q16514 161 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ANO4Q32M45 955 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 FASTKD1Q53R41 847 aaKnown RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 PPM1JQ5JR12 505 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 AARS2Q5JTZ9 985 aaKnown RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 ZCCHC23Q6ZST2 131 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 LINC00523Q86TU6 105 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 IGFN1Q86VF2 1251 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ZNF354CQ86Y25 554 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 DLG3Q92796 817 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 TRMT2BQ96GJ1 504 aaKnown RBP15.34■□□□□ 0.05
PNKP-204ENST00000594661 MED30Q96HR3 178 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 ALPK1Q96QP1 1244 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 RBBP8Q99708 897 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 FICDQ9BVA6 458 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 KLHL25Q9H0H3 589 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 SP110Q9HB58 689 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 IL23AQ9NPF7 189 aa15.34■□□□□ 0.05
PNKP-204ENST00000594661 GKN1Q9NS71 199 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms