RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MIER2Q8N344 545 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TUBGCP3Q96CW5 907 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 SUSD3Q96L08 255 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 SEMA3CQ99985 751 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TUBB1Q9H4B7 451 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 TMEM248Q9NWD8 314 aa16.45■□□□□ 0.22
LIG1-206ENST00000594067 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.45■□□□□ 0.222e-6■■■■□ 22.1
LIG1-206ENST00000594067 MIA3Q5JRA6 1907 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 CCDC162PA2VCL2 907 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 TRIM64A6NGJ6 449 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 BBIP1A8MTZ0 92 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 ZNF701M0R085 212 aaPredicted RBP16.44■□□□□ 0.22
LIG1-206ENST00000594067 ATP6V1G1O75348 118 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 MTHFD2P13995 350 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 GFAPP14136 432 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 THPOP40225 353 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 ESRRGP62508 458 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 MGAT3Q09327 533 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 RAB44Q7Z6P3 723 aaPredicted RBP16.44■□□□□ 0.22
LIG1-206ENST00000594067 ZNF786Q8N393 782 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 CBR4Q8N4T8 237 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 ADAM2Q99965 735 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 MTG1Q9BT17 334 aaPredicted RBP16.44■□□□□ 0.22
LIG1-206ENST00000594067 DCUN1D5Q9BTE7 237 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 CCM2LQ9NUG4 571 aaPredicted RBP16.44■□□□□ 0.22
LIG1-206ENST00000594067 HACD3Q9P035 362 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 GMIPQ9P107 970 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 LOC285095A0A1B0GVY8 99 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 TMX2-CTNND1H3BSU7 103 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 ZNF623O75123 536 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 HGFP14210 728 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 GRK4P32298 578 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 MAGEA8P43361 318 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 ANKDD1AQ495B1 522 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 FBXL22Q6P050 247 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 TTC33Q6PID6 262 aaPredicted RBP16.44■□□□□ 0.22
LIG1-206ENST00000594067 MON1AQ86VX9 555 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 EPHX4Q8IUS5 362 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 PHYKPLQ8IUZ5 450 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 TEX26Q8N6G2 289 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 CMTM6Q9NX76 183 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 FNIP2Q9P278 1114 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 NDUFAF1Q9Y375 327 aa16.44■□□□□ 0.22
LIG1-206ENST00000594067 FOXD2O60548 495 aaPredicted RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 ZNF37AP17032 561 aaPredicted RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 MYF6P23409 242 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 ECT2LQ008S8 904 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 RPS6KA2Q15349 733 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 LYSMD3Q7Z3D4 306 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 MIB1Q86YT6 1006 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 HOPXQ9BPY8 73 aaPredicted RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 HIPK3Q9H422 1215 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 CDH7Q9ULB5 785 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 DHRS12A0PJE2 317 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 FXYD1O00168 92 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 MUSKO15146 869 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 CLASP2O75122 1294 aaKnown RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 ATE1O95260 518 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 FGF4P08620 206 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 SOX11P35716 441 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 ACVRL1P37023 503 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 APLP1P51693 650 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 POLD3Q15054 466 aaPredicted RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 INTS11Q5TA45 600 aaKnown RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 KANK2Q63ZY3 851 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 MSANTD2Q6P1R3 559 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 PATL1Q86TB9 770 aaKnown RBP16.43■□□□□ 0.22
LIG1-206ENST00000594067 SERINC5Q86VE9 423 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 CAMK1DQ8IU85 385 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 CPNE9Q8IYJ1 553 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 PACRGLQ8N7B6 248 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 ZUFSPQ96AP4 578 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 ABCD2Q9UBJ2 740 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 POLG2Q9UHN1 485 aa16.43■□□□□ 0.22
LIG1-206ENST00000594067 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
LIG1-206ENST00000594067 B4GALT3O60512 393 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 MRNIPQ6NTE8 343 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 TADA1Q96BN2 335 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 ATOH8Q96SQ7 321 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 ADI1Q9BV57 179 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 NPLQ9BXD5 320 aaPredicted RBP16.42■□□□□ 0.22
LIG1-206ENST00000594067 SEMA4BQ9NPR2 832 aaPredicted RBP16.42■□□□□ 0.22
LIG1-206ENST00000594067 SCML2Q9UQR0 700 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 SH3GLB1Q9Y371 365 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 TIMM22Q9Y584 194 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 UBA6A0AVT1 1052 aaPredicted RBP16.42■□□□□ 0.22
LIG1-206ENST00000594067 SUPT3HB4E1H0 165 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 RAMP2O60895 175 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 SUPT3HO75486 399 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 AKR1A1P14550 325 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 LBPP18428 481 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 EEF1DP29692 281 aaKnown RBP16.42■□□□□ 0.22
LIG1-206ENST00000594067 OXTRP30559 389 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 DIO3P55073 304 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 ATP6V0D1P61421 351 aa16.42■□□□□ 0.22
LIG1-206ENST00000594067 MERTKQ12866 999 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms