RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 F11P03951 625 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 EEF1DP29692 281 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 LCP2Q13094 533 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 PLD1Q13393 1074 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 PTPRNQ16849 979 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 FAM156AQ8NDB6 213 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 TRPC4APQ8TEL6 797 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 GPR21Q99679 349 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 COPS7BQ9H9Q2 264 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 FBRSL1Q9HCM7 1045 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 MED16Q9Y2X0 877 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 PCDHGC4Q9Y5F7 938 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 OAS3Q9Y6K5 1087 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 GBF1Q92538 1859 aa16.5■□□□□ 0.23
PRKCSH-217ENST00000592741 PRSS51A0A1B0GVH4 220 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 CAPN8A6NHC0 703 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 BBIP1A8MTZ0 92 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TXNDC9O14530 226 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 PIP5K1BO14986 540 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TRIM24O15164 1050 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 VPS26AO75436 327 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ECI2O75521 394 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 EFEMP2O95967 443 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ALDOCP09972 364 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 HDCP19113 662 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 MC4RP32245 332 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TTPAP49638 278 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 NAA20P61599 178 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 CLCQ05315 142 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TRIM25Q14258 630 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 SETMARQ53H47 684 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 FAM219BQ5XKK7 198 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 CXorf57Q6NSI4 855 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 PAOXQ6QHF9 649 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ZNF783Q6ZMS7 281 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 DDIASQ8IXT1 998 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 EFHBQ8N7U6 833 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 OR9I1Q8NGQ6 314 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 SCLYQ96I15 445 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 MYRFLQ96LU7 910 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 KLHL32Q96NJ5 620 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 NSUN5Q96P11 429 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TRAPPC9Q96Q05 1148 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 KLF16Q9BXK1 252 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 HSFX1Q9UBD0 423 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 FKBPLQ9UIM3 349 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 HTTP42858 3142 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 CRCPO75575 148 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TMCC1O94876 653 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 PKMP14618 531 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 GPX3P22352 226 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ARF5P84085 180 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TRAP1Q12931 704 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TSNQ15631 228 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 SAMD4BQ5PRF9 694 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ANKS6Q68DC2 871 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 SNX31Q8N9S9 440 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 PCYOX1LQ8NBM8 494 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ADCY4Q8NFM4 1077 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 PIP4K2CQ8TBX8 421 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 GBP5Q96PP8 586 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 SMIM14Q96QK8 99 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 ZBED2Q9BTP6 218 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 Q9H521 79 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 TRMT6Q9UJA5 497 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 YIPF1Q9Y548 306 aa16.49■□□□□ 0.23
PRKCSH-217ENST00000592741 NPEPPSL1A6NEC2 478 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 ANKRD66B4E2M5 251 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 PPP6CO00743 305 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 CDKN1CP49918 316 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 FOLH1Q04609 750 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 TRAF2Q12933 501 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 VEPH1Q14D04 833 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 ZRANB3Q5FWF4 1079 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 AARS2Q5JTZ9 985 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 RNF220Q5VTB9 566 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 RNF168Q8IYW5 571 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 ST13P4Q8IZP2 240 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 ZNF461Q8TAF7 563 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 ROPN1LQ96C74 230 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 IGSF21Q96ID5 467 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 GCNAQ96QF7 691 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 CLSTN3Q9BQT9 956 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 RNF38Q9H0F5 515 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 IKZF3Q9UKT9 509 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 C2orf78A6NCI8 922 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 BTN3A1O00481 513 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 STX16O14662 325 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 PQBP1O60828 265 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 VPS4BO75351 444 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 C1RP00736 705 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 C8BP07358 591 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 RPS17P08708 135 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms