RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 B3GNT8Q7Z7M8 397 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 PDZD3Q86UT5 571 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 ZC3H18Q86VM9 953 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 RAVER1Q8IY67 606 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 RCOR2Q8IZ40 523 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 Q8N9G6 341 aaPredicted RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 SPATA22Q8NHS9 363 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 KIAA1524Q8TCG1 905 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 CCHCR1Q8TD31 782 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 ZDHHC1Q8WTX9 485 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 TFB1MQ8WVM0 346 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 P3H4Q92791 437 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 EID2BQ96D98 161 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 SCARF2Q96GP6 870 aaPredicted RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 COX14Q96I36 57 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 TEKT5Q96M29 485 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 OR2M4Q96R27 311 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 GFM1Q96RP9 751 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 LRRN3Q9H3W5 708 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 PKD2L2Q9NZM6 624 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 LRIT1Q9P2V4 623 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 ZFHX4Q86UP3 3567 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 FADS2P1A8MWK0 482 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 D6RAR5 112 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 ATP1A1P05023 1023 aaKnown RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 FGF1P05230 155 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 CD68P34810 354 aaPredicted RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 ABCG1P45844 678 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 CDK18Q07002 472 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 SLC14A2Q15849 920 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 PYCR3Q53H96 274 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 LRRC69Q6ZNQ3 347 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 C17orf82Q86X59 251 aaPredicted RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 LSMEM2Q8N112 164 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 ACRBPQ8NEB7 543 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 EXD1Q8NHP7 514 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 PATE1Q8WXA2 126 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 PRR11Q96HE9 360 aaPredicted RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 RBM41Q96IZ5 413 aaKnown RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 ZNF578Q96N58 590 aaPredicted RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 CDH19Q9H159 772 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 FAM83DQ9H4H8 585 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 ASCL3Q9NQ33 180 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 UBP1Q9NZI7 540 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 CNOT6Q9ULM6 557 aaKnown RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.79□□□□□ -0.2
APOC1-208ENST00000592535 ZNF711Q9Y462 761 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 OAS3Q9Y6K5 1087 aaKnown RBP13.79□□□□□ -0.2
APOC1-208ENST00000592535 DUSP10Q9Y6W6 482 aa13.79□□□□□ -0.2
APOC1-208ENST00000592535 DSPP15924 2871 aaKnown RBP13.78□□□□□ -0.2
APOC1-208ENST00000592535 CELSR3Q9NYQ7 3312 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 RGSL1A5PLK6 1076 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 RRP8O43159 456 aaKnown RBP13.78□□□□□ -0.2
APOC1-208ENST00000592535 NUDT21O43809 227 aaKnown RBP13.78□□□□□ -0.2
APOC1-208ENST00000592535 PMPCBO75439 489 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
APOC1-208ENST00000592535 ASMTLO95671 621 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 ECEL1O95672 775 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 SLC4A1P02730 911 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 PNLIPP16233 465 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 NFKB1P19838 968 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 ACTR1BP42025 376 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 ACTR1AP61163 376 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 CCDC173Q0VFZ6 552 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 PPP2R5EQ16537 467 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 BBS12Q6ZW61 710 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 SPRED1Q7Z699 444 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 GALNT13Q8IUC8 556 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 NAGSQ8N159 534 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 QKIQ96PU8 341 aaKnown RBP eCLIP13.78□□□□□ -0.2
APOC1-208ENST00000592535 HERPUD2Q9BSE4 406 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 FOXP3Q9BZS1 431 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 LACRTQ9GZZ8 138 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 EPB41L5Q9HCM4 733 aa13.78□□□□□ -0.2
APOC1-208ENST00000592535 ATXN7L1Q9ULK2 861 aaPredicted RBP13.78□□□□□ -0.2
APOC1-208ENST00000592535 CCDC187A0A096LP49 1063 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 MTSS1O43312 755 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 DNAJC6O75061 913 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 NDST3O95803 873 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 RBMS1P29558 406 aaKnown RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 CTNNA1P35221 906 aaKnown RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 INHBCP55103 352 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 NAP1L1P55209 391 aaKnown RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 PCBP4P57723 403 aaKnown RBP13.77□□□□□ -0.21
APOC1-208ENST00000592535 ERVPABLB-1P60509 514 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 B4GALNT1Q00973 533 aa13.77□□□□□ -0.21
APOC1-208ENST00000592535 ALS2CLQ60I27 953 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms