RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TAF4O00268 1085 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 TJP3O95049 919 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 FTCDO95954 541 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 EPOP01588 193 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 GNPDA1P46926 289 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 WNT3AP56704 352 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 CCDC70Q6NSX1 233 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 OGFOD3Q6PK18 319 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 TMC3Q7Z5M5 1100 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 TRIM74Q86UV6 250 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 RNF10Q8N5U6 811 aaKnown RBP27.08■■□□□ 1.93
SMAD4-213ENST00000591914 FAM46DQ8NEK8 389 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 GPR156Q8NFN8 814 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 OXNAD1Q96HP4 312 aaPredicted RBP27.08■■□□□ 1.93
SMAD4-213ENST00000591914 SRPK1Q96SB4 655 aaKnown RBP27.08■■□□□ 1.93
SMAD4-213ENST00000591914 C10orf88Q9H8K7 445 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 CNOT6Q9ULM6 557 aaKnown RBP27.08■■□□□ 1.93
SMAD4-213ENST00000591914 SHOC2Q9UQ13 582 aa27.08■■□□□ 1.93
SMAD4-213ENST00000591914 COL27A1Q8IZC6 1860 aaPredicted RBP27.08■■□□□ 1.93
SMAD4-213ENST00000591914 RP1P56715 2156 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 DDX3YO15523 660 aaKnown RBP27.07■■□□□ 1.92
SMAD4-213ENST00000591914 DOK6Q6PKX4 331 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 NRROSQ86YC3 692 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 CDKL3Q8IVW4 592 aaPredicted RBP27.07■■□□□ 1.92
SMAD4-213ENST00000591914 NXPE2Q96DL1 559 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 HES6Q96HZ4 224 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 NRSN2Q9GZP1 204 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 CDH19Q9H159 772 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 NFKBIL1Q9UBC1 381 aaPredicted RBP27.07■■□□□ 1.92
SMAD4-213ENST00000591914 TMEM98Q9Y2Y6 226 aa27.07■■□□□ 1.92
SMAD4-213ENST00000591914 SRRM3A6NNA2 597 aaPredicted RBP27.06■■□□□ 1.92
SMAD4-213ENST00000591914 FADS2P1A8MWK0 482 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 INPP4BO15327 924 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 RBP3P10745 1247 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 DCDC1P59894 354 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 EIF3EP60228 445 aaKnown RBP27.06■■□□□ 1.92
SMAD4-213ENST00000591914 CYP4F3Q08477 520 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 ILF3Q12906 894 aaKnown RBP eCLIP27.06■■□□□ 1.92
SMAD4-213ENST00000591914 RTP5Q14D33 572 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 MRGPRX2Q96LB1 330 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 DEPDC7Q96QD5 511 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 CCDC3Q9BQI4 270 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 FERMT1Q9BQL6 677 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 GSDMCQ9BYG8 508 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 TSGA10Q9BZW7 698 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 GBA3Q9H227 469 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 SUDS3Q9H7L9 328 aaPredicted RBP27.06■■□□□ 1.92
SMAD4-213ENST00000591914 RSPH14Q9UHP6 348 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 SPO11Q9Y5K1 396 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 ST14Q9Y5Y6 855 aa27.06■■□□□ 1.92
SMAD4-213ENST00000591914 F5H423 210 aaPredicted RBP27.05■■□□□ 1.92
SMAD4-213ENST00000591914 ARHGAP6O43182 974 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 NOBOXO60393 691 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 ADCY8P40145 1251 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 MPP3Q13368 585 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 GPR26Q8NDV2 337 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 CCDC112Q8NEF3 446 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 OR6C4Q8NGE1 309 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 FAM118BQ9BPY3 351 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 GPR63Q9BZJ6 419 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 DPEP2Q9H4A9 486 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 RAD18Q9NS91 495 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 VPS18Q9P253 973 aa27.05■■□□□ 1.92
SMAD4-213ENST00000591914 ANKRD11Q6UB99 2663 aaPredicted RBP27.04■■□□□ 1.92
SMAD4-213ENST00000591914 CTBSQ01459 385 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 PYCR3Q53H96 274 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 SIRPB2Q5JXA9 342 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 SFTPA2Q8IWL1 248 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 WDR48Q8TAF3 677 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 CCDC74AQ96AQ1 378 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 OR2M4Q96R27 311 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 GORASP1Q9BQQ3 440 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 SPATS2LQ9NUQ6 558 aaKnown RBP27.04■■□□□ 1.92
SMAD4-213ENST00000591914 RABGEF1Q9UJ41 708 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 PCDHB1Q9Y5F3 818 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 OAS3Q9Y6K5 1087 aaKnown RBP27.04■■□□□ 1.92
SMAD4-213ENST00000591914 ARHGEF17Q96PE2 2063 aaPredicted RBP27.04■■□□□ 1.92
SMAD4-213ENST00000591914 APC2O95996 2303 aa27.04■■□□□ 1.92
SMAD4-213ENST00000591914 B4DGG1 531 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 AURKAO14965 403 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 KRT86O43790 486 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 CSO75390 466 aaKnown RBP27.03■■□□□ 1.92
SMAD4-213ENST00000591914 TCEA3O75764 348 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 SLC4A1P02730 911 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 CHRNA4P43681 627 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 KLF1Q13351 362 aaPredicted RBP27.03■■□□□ 1.92
SMAD4-213ENST00000591914 HLTFQ14527 1009 aaKnown RBP eCLIP27.03■■□□□ 1.92
SMAD4-213ENST00000591914 SLC1A5Q15758 541 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 C14orf28Q4W4Y0 310 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 CERCAMQ5T4B2 595 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 ITPRIPL1Q6GPH6 555 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 DARS2Q6PI48 645 aaKnown RBP27.03■■□□□ 1.92
SMAD4-213ENST00000591914 IPMKQ8NFU5 416 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 ZSCAN5AQ9BUG6 496 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 TRABDQ9H4I3 376 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 TAAR2Q9P1P5 351 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 SCN8AQ9UQD0 1980 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 CELSR3Q9NYQ7 3312 aa27.03■■□□□ 1.92
SMAD4-213ENST00000591914 CASC3O15234 703 aaKnown RBP27.02■■□□□ 1.92
SMAD4-213ENST00000591914 KCNN4O15554 427 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms