RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 KLHL30Q0D2K2 578 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 ILF3Q12906 894 aaKnown RBP eCLIP9.45□□□□□ -0.9
BRCA1-226ENST00000591534 NFATC3Q12968 1075 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PTP4A2Q12974 167 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 ASIC2Q16515 512 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 MAP9Q49MG5 647 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PHF19Q5T6S3 580 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 ATG14Q6ZNE5 492 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 B3GNT8Q7Z7M8 397 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 SRLQ86TD4 932 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 CAMK1DQ8IU85 385 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PYROXD2Q8N2H3 581 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 BBS5Q8N3I7 341 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 TC2NQ8N9U0 490 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 EXOC2Q96KP1 924 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 MCEEQ96PE7 176 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 GSDMCQ9BYG8 508 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 SEMA4CQ9C0C4 833 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 NOL6Q9H6R4 1146 aaKnown RBP9.45□□□□□ -0.9
BRCA1-226ENST00000591534 WDR26Q9H7D7 661 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 SP110Q9HB58 689 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 NPHS2Q9NP85 383 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 MYO1AQ9UBC5 1043 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 VTI1BQ9UEU0 232 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 MOSPD1Q9UJG1 213 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 PNMA8BQ9ULN7 279 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-226ENST00000591534 COQ6Q9Y2Z9 468 aa9.45□□□□□ -0.9
BRCA1-226ENST00000591534 A0A1W2PQM1 296 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 B4DGG1 531 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 STMND1H3BQB6 276 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 EEF2KO00418 725 aaKnown RBP9.44□□□□□ -0.9
BRCA1-226ENST00000591534 HGSO14964 777 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-226ENST00000591534 INSIG1O15503 277 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 KRT86O43790 486 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 RNF8O76064 485 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 CPNE6O95741 557 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 RARAP10276 462 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 NFKB1P19838 968 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 CES1P23141 567 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 TRIM23P36406 574 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 PRKCIP41743 596 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 PAPOLAP51003 745 aaKnown RBP9.44□□□□□ -0.9
BRCA1-226ENST00000591534 CTBSQ01459 385 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 ACOX1Q15067 660 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 TCEA2Q15560 299 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 TDRD12Q587J7 1177 aaKnown RBP9.44□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF662Q6ZS27 426 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 SPRED1Q7Z699 444 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 NDUFAF2Q8N183 169 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 LZTR1Q8N653 840 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 NSMCE1Q8WV22 266 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 FUBP1Q96AE4 644 aaKnown RBP9.44□□□□□ -0.9
BRCA1-226ENST00000591534 VOPP1Q96AW1 172 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 AGPAT1Q99943 283 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 SEMA3CQ99985 751 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 DPYSL5Q9BPU6 564 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 KLC2Q9H0B6 622 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 LRRC19Q9H756 370 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 CYP4F12Q9HCS2 524 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 PHPT1Q9NRX4 125 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-226ENST00000591534 PARVAQ9NVD7 372 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 TAS2R14Q9NYV8 317 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 INTUQ9ULD6 942 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 RNF215Q9Y6U7 377 aa9.44□□□□□ -0.9
BRCA1-226ENST00000591534 DOCK9Q9BZ29 2069 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PRAMEF33A0A0G2JMD5 474 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PMS2P1A4D2B8 440 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 TMEM202A6NGA9 273 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 LRRC53A6NM62 1247 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 J3KR12 359 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PRPSAP2O60256 369 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 BUB1BO60566 1050 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PRAMEF10O60809 474 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PPFIA2O75334 1257 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 MYCLP1P12525 358 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 HGFP14210 728 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 HSPA9P38646 679 aaKnown RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 NOP2P46087 812 aaKnown RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 GPR3P46089 330 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 SCNN1BP51168 640 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 MAPK10P53779 464 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 IL10RBQ08334 325 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 TRA2AQ13595 282 aaKnown RBP eCLIP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 HLTFQ14527 1009 aaKnown RBP eCLIP9.43□□□□□ -0.93e-6■■□□□ 13.4
BRCA1-226ENST00000591534 ERMARDQ5T6L9 678 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 AFMIDQ63HM1 303 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 ACAD10Q6JQN1 1059 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PNCKQ6P2M8 343 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 LIPIQ6XZB0 460 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 DPPA4Q7L190 304 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 MON1BQ7L1V2 547 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 IRF2BP2Q7Z5L9 587 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PSTKQ8IV42 348 aaKnown RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 GPBAR1Q8TDU6 330 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 FBF1Q8TES7 1133 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 OR1E3Q8WZA6 343 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 USP7Q93009 1102 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms