RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 PTCRAQ6ISU1 281 aaPredicted RBP12.94□□□□□ -0.34
PTBP1-216ENST00000590887 SH2D5Q6ZV89 423 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 ERN2Q76MJ5 926 aaKnown RBP12.94□□□□□ -0.34
PTBP1-216ENST00000590887 RBFAQ8N0V3 343 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 RAB3IL1Q8TBN0 382 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 MDM1Q8TC05 714 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 DENND1AQ8TEH3 1009 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 CKAP2Q8WWK9 683 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 KLF6Q99612 283 aaPredicted RBP12.94□□□□□ -0.34
PTBP1-216ENST00000590887 TSSK1BQ9BXA7 367 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 EPN3Q9H201 632 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 SUDS3Q9H7L9 328 aaPredicted RBP12.94□□□□□ -0.34
PTBP1-216ENST00000590887 PCDH12Q9NPG4 1184 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 PRSS16Q9NQE7 514 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 SLC2A4RGQ9NR83 387 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 NFKBIL1Q9UBC1 381 aaPredicted RBP12.94□□□□□ -0.34
PTBP1-216ENST00000590887 GNPTGQ9UJJ9 305 aa12.94□□□□□ -0.34
PTBP1-216ENST00000590887 HMX2A2RU54 273 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 QSOX1O00391 747 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 PRMT5O14744 637 aaPredicted RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 ASMTLO95671 621 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CTSLP07711 333 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 ELFN1P0C7U0 828 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 HLA-EP13747 358 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 PKMP14618 531 aaKnown RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CREB1P16220 341 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 BPIP17213 487 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 RPS3P23396 243 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■■■■□ 21.2
PTBP1-216ENST00000590887 TIE1P35590 1138 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 PTSQ03393 145 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 PDAP1Q13442 181 aaKnown RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CAMK2GQ13555 558 aaPredicted RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 PEX6Q13608 980 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 PDE1CQ14123 709 aaPredicted RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 SMAD1Q15797 465 aaKnown RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CRY1Q16526 586 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 TMEM196Q5HYL7 178 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 EOGTQ5NDL2 527 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 ZNF776Q68DI1 518 aaPredicted RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CNSTQ6PJW8 725 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CPLX4Q7Z7G2 160 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 OR2T3Q8NH03 318 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 RDH11Q8TC12 318 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CXorf40AQ8TE69 158 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CHMP6Q96FZ7 201 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 FAM129BQ96TA1 746 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 OMDQ99983 421 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 ZSCAN5AQ9BUG6 496 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CLPBQ9H078 707 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 GPAMQ9HCL2 828 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 SLC17A6Q9P2U8 582 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 NCKAP1Q9Y2A7 1128 aa12.93□□□□□ -0.34
PTBP1-216ENST00000590887 MRPS17Q9Y2R5 130 aaKnown RBP12.93□□□□□ -0.34
PTBP1-216ENST00000590887 OR51F1A6NGY5 319 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 E5RI56 91 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 K7EQS6 105 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 CCL22O00626 93 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 WNT9AO14904 365 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 TSPAN6O43657 245 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 LZTS3O60299 673 aaPredicted RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 RHOBTB1O94844 696 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 KLHL2O95198 593 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 DNTTP04053 509 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 RBP1P09455 135 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ADRB3P13945 408 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 TAC1P20366 129 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 GABRB3P28472 473 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 NSG1P42857 185 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 KIR2DL1P43626 348 aaPredicted RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 XIAPP98170 497 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ZBTB16Q05516 673 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 NFATC2Q13469 925 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 PTPRCAPQ14761 206 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 PON2Q15165 354 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 PDK4Q16654 411 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 TMEM52BQ4KMG9 183 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 PTRHD1Q6GMV3 140 aaKnown RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 FAM151BQ6UXP7 276 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 CYP2U1Q7Z449 544 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 NLRP8Q86W28 1048 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ZSWIM9Q86XI8 627 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 MMAAQ8IVH4 418 aaKnown RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 NKAPQ8N5F7 415 aaKnown RBP12.92□□□□□ -0.34
PTBP1-216ENST00000590887 TRAM1L1Q8N609 369 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ZNF366Q8N895 744 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 PPP1R14CQ8TAE6 165 aa12.92□□□□□ -0.34
PTBP1-216ENST00000590887 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms