RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ADGRG4Q8IZF6 3080 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PDZD2O15018 2839 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 PIPSLA2A3N6 862 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 WIPF3A6NGB9 483 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 NPIPB15A6NHN6 443 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 KIAA0754O94854 1291 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 ERCC5P28715 1186 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 VIPR1P32241 457 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 FMO1Q01740 532 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 HHEXQ03014 270 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 MAP7Q14244 749 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 INPP5JQ15735 1006 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 C1QL3Q5VWW1 255 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 ARHGAP12Q8IWW6 846 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 NPWQ8N729 165 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 Q8NA96 180 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 CINPQ9BW66 212 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 OGFRQ9NZT2 677 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 TBC1D29Q9UFV1 150 aa12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 HOOK1Q9UJC3 728 aaKnown RBP12.68□□□□□ -0.38
PRKCSH-210ENST00000589990 CREG1O75629 220 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 LDLRP01130 860 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 GPD1P21695 349 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 MAN1A1P33908 653 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 SEPHS1P49903 392 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 POLR2LP62875 67 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 CA9Q16790 459 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 HSP90AA4PQ58FG1 418 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 KLHDC7AQ5VTJ3 777 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 TECPR1Q7Z6L1 1165 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 PGBD5Q8N414 524 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 CT55Q8WUE5 264 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 SCAMP4Q969E2 229 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 C19orf60Q96EN9 201 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 PCDHB18PQ96TA0 734 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 KCNK6Q9Y257 313 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 F8P00451 2351 aa12.67□□□□□ -0.38
PRKCSH-210ENST00000589990 A6NCN8 305 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 F8VZ95 297 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 INPP4BO15327 924 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 HTRA2O43464 458 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 KRT86O43790 486 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 TIAF1O95411 115 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 FGFR1OPO95684 399 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 DDAH2O95865 285 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 KRT3P12035 628 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 PRF1P14222 555 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 CTPS1P17812 591 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 GPR1P46091 355 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 RPL7AP62424 266 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 SLC10A7Q0GE19 358 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 TRAF2Q12933 501 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 DNASE1L3Q13609 305 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 IYDQ6PHW0 289 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 ELOA2Q8IYF1 753 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 STAMBPL1Q96FJ0 436 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 OR6C1Q96RD1 312 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 ABCG8Q9H221 673 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 SARS2Q9NP81 518 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 NF1P21359 2839 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 CROCCQ5TZA2 2017 aa12.66□□□□□ -0.38
PRKCSH-210ENST00000589990 MN1Q10571 1320 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 DFFAO00273 331 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 KIF1CO43896 1103 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 SNX2O60749 519 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 GFPT2O94808 682 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 NDUFA10O95299 355 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 CPP00450 1065 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 UCHL3P15374 230 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 TYRP1P17643 537 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 PGDP52209 483 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 NDST2P52849 883 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 TPI1P60174 286 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 OGDHQ02218 1023 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 NSUN2Q08J23 767 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 IL10RAQ13651 578 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 FAM199XQ6PEV8 388 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 CHST15Q7LFX5 561 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 GALNT13Q8IUC8 556 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 SLC25A23Q9BV35 468 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 NDST4Q9H3R1 872 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 ACTL8Q9H568 366 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 SP110Q9HB58 689 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms