RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	CARS2	Q9HA77	564 aa	Known RBP	9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	USP29	Q9HBJ7	922 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	ARFGAP3	Q9NP61	516 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	LZTFL1	Q9NQ48	299 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	FAM153A	Q9UHL3	310 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	MOSPD1	Q9UJG1	213 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	CNOT6	Q9ULM6	557 aa	Known RBP	9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	SUFU	Q9UMX1	484 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	SLC17A4	Q9Y2C5	497 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	PLEKHM1	Q9Y4G2	1056 aa		9.82	□□□□□ -0.84
PTPN2-208	ENST00000589216	LOC285095	A0A1B0GVY8	99 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	CPED1	A4D0V7	1026 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216		B4DGG1	531 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	TNFRSF10C	O14798	259 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	BUD23	O43709	281 aa	Known RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	KRT86	O43790	486 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	OPA1	O60313	960 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	NOBOX	O60393	691 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ATP1A1	P05023	1023 aa	Known RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	PROS1	P07225	676 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	CTSE	P14091	401 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	KEL	P23276	732 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	AK4	P27144	223 aa	Predicted RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	CA5A	P35218	305 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	BLK	P51451	505 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ILK	Q13418	452 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ELOC	Q15369	112 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	SLC1A5	Q15758	541 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	KCTD19	Q17RG1	926 aa	Predicted RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	KHDC1	Q4VXA5	237 aa	Known RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ANKRD20A2	Q5SQ80	823 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ZNF648	Q5T619	568 aa	Predicted RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ANKRD20A1	Q5TYW2	823 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ANKRD20A3	Q5VUR7	823 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	DARS2	Q6PI48	645 aa	Known RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	TMC3	Q7Z5M5	1100 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	TXLNB	Q8N3L3	684 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	GALNT15	Q8N3T1	639 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	RNF10	Q8N5U6	811 aa	Known RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ARL10	Q8N8L6	244 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	MDM1	Q8TC05	714 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	PATE1	Q8WXA2	126 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ZCCHC14	Q8WYQ9	949 aa	Known RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	SPATA13	Q96N96	652 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	VAT1	Q99536	393 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	FICD	Q9BVA6	458 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	DUSP23	Q9BVJ7	150 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	TSGA10	Q9BZW7	698 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	ZFYVE1	Q9HBF4	777 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	TMPRSS11E	Q9UL52	423 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	DNPEP	Q9ULA0	475 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	GPR34	Q9UPC5	381 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	PRKAB1	Q9Y478	270 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	PCDHB1	Q9Y5F3	818 aa		9.81	□□□□□ -0.84
PTPN2-208	ENST00000589216	PMS2P1	A4D2B8	440 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	EME2	A4GXA9	379 aa	Predicted RBP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TAF4	O00268	1085 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	GAPDHS	O14556	408 aa	Predicted RBP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	USP12	O75317	370 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TJP3	O95049	919 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	AGT	P01019	485 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TNF	P01375	233 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	IVL	P07476	585 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	CCDC175	P0C221	793 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	BPI	P17213	487 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	ADRA1A	P35348	466 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	ADCY8	P40145	1251 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	PDX1	P52945	283 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	MAZ	P56270	477 aa	Known RBP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	DCDC1	P59894	354 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TARDBP	Q13148	414 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	PTPRCAP	Q14761	206 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	NR0B2	Q15466	257 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	HS1BP3	Q53T59	392 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	MEI1	Q5TIA1	1274 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	CDCP2	Q5VXM1	449 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	SLC30A9	Q6PML9	568 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TAF8	Q7Z7C8	310 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TMPRSS12	Q86WS5	348 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	GKN2	Q86XP6	184 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	NRSN1	Q8IZ57	195 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	TAB3	Q8N5C8	712 aa	Predicted RBP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	DCBLD1	Q8N8Z6	715 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	FAM71D	Q8N9W8	422 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	ATL2	Q8NHH9	583 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	SLC35B2	Q8TB61	432 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	GPBAR1	Q8TDU6	330 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	CCDC74A	Q96AQ1	378 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	SCARF2	Q96GP6	870 aa	Predicted RBP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	HIC2	Q96JB3	615 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	OR2M4	Q96R27	311 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	FSD1L	Q9BXM9	530 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	GPR63	Q9BZJ6	419 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	KCNF1	Q9H3M0	494 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	FAM83D	Q9H4H8	585 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	MAGEE1	Q9HCI5	957 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	BPIFA1	Q9NP55	256 aa		9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	SPATS2L	Q9NUQ6	558 aa	Known RBP	9.8	□□□□□ -0.84
PTPN2-208	ENST00000589216	KCTD5	Q9NXV2	234 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms