RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 IL31Q6EBC2 164 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 OR52E8Q6IFG1 317 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 KBTBD2Q8IY47 623 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ATAD1Q8NBU5 361 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 PHC3Q8NDX5 983 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 OR4L1Q8NH43 312 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 RHEBL1Q8TAI7 183 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 STAG3L4Q8TBR4 150 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 BLOC1S5Q8TDH9 187 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TADA1Q96BN2 335 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ASB9Q96DX5 294 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 SEPT5Q99719 369 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 OLFM1Q99784 485 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TSEN34Q9BSV6 310 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ZCCHC2Q9C0B9 1178 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ALG9Q9H6U8 611 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CYP4F12Q9HCS2 524 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CATSPERZQ9NTU4 200 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TAS2R13Q9NYV9 303 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 DNMT3LQ9UJW3 386 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 FNDC3AQ9Y2H6 1198 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CRYL1Q9Y2S2 319 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 FIS1Q9Y3D6 152 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TRPM7Q96QT4 1865 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 BBIP1A8MTZ0 92 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 METTL12A8MUP2 240 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 F8W810 466 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TXNDC9O14530 226 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 LDB2O43679 373 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TLR5O60602 858 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 NDST3O95803 873 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 IGLV3-27P01718 113 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 PF4P02776 101 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 PYGLP06737 847 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 MMP2P08253 660 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 HMBSP08397 361 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CTGFP29279 349 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CCR10P46092 362 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TUFMP49411 452 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 THOP1P52888 689 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TRIM25Q14258 630 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 AGKQ53H12 422 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ARSJQ5FYB0 599 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 SAMD4BQ5PRF9 694 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 PPM1LQ5SGD2 360 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ZNF678Q5SXM1 525 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 GPR158Q5T848 1215 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 OGFRL1Q5TC84 451 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 LPCAT4Q643R3 524 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 EFL1Q7Z2Z2 1120 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ISCA2Q86U28 154 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 SPATA24Q86W54 205 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 PELI3Q8N2H9 469 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 BHLHE22Q8NFJ8 381 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ARRDC2Q8TBH0 407 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 IGSF8Q969P0 613 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ROPN1LQ96C74 230 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 MOCOSQ96EN8 888 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TBATAQ96M53 351 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 CINPQ9BW66 212 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ADGRE3Q9BY15 652 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 SEZ6LQ9BYH1 1024 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 SPAG4Q9NPE6 437 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 SUCOQ9UBS9 1254 aaKnown RBP7.39□□□□□ -1.23
ZNF540-206ENST00000589117 RAB26Q9ULW5 256 aa7.39□□□□□ -1.23
ZNF540-206ENST00000589117 TCAF2A6NFQ2 919 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 NEMP2A6NFY4 417 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 AURKAO14965 403 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 NDUFS3O75489 264 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 CLDN11O75508 207 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 CRCPO75575 148 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 TBX18O95935 607 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 CHEK2O96017 543 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 GOT2P00505 430 aaKnown RBP7.38□□□□□ -1.23
ZNF540-206ENST00000589117 SLC4A1P02730 911 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 FGF4P08620 206 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 ZCCHC18P0CG32 403 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 GFAPP14136 432 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 TACR2P21452 398 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 FGFR3P22607 806 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 PEX2P28328 305 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 PSMD8P48556 350 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 GPR15P49685 360 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 PGGT1BP53609 377 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 CDH4P55283 916 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 PSME3P61289 254 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 ATP6V0D1P61421 351 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 MRPS22P82650 360 aaKnown RBP7.38□□□□□ -1.23
ZNF540-206ENST00000589117 FOLH1Q04609 750 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 RAD51Q06609 339 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 RPS6KA2Q15349 733 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 PRMT9Q6P2P2 845 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 HACD2Q6Y1H2 254 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 RTN4RL1Q86UN2 441 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-206ENST00000589117 LGI2Q8N0V4 545 aa7.38□□□□□ -1.23
ZNF540-206ENST00000589117 RYBPQ8N488 228 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-206ENST00000589117 GOLM1Q8NBJ4 401 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms