RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 AGAP2Q99490 1192 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 RIOK2Q9BVS4 552 aaKnown RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 HEMGNQ9BXL5 484 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 TSGA10Q9BZW7 698 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 GBA3Q9H227 469 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 TRABDQ9H4I3 376 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CCDC86Q9H6F5 360 aaKnown RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 CARS2Q9HA77 564 aaKnown RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 ZFYVE1Q9HBF4 777 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CYP4F12Q9HCS2 524 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 KLHL8Q9P2G9 620 aaPredicted RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 TRIM10Q9UDY6 481 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CD84Q9UIB8 345 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 APPL1Q9UKG1 709 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CNOT6Q9ULM6 557 aaKnown RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 PADI4Q9UM07 663 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 DOLKQ9UPQ8 538 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CAPN6Q9Y6Q1 641 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 ITPR1Q14643 2758 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 TRABD2BA6NFA1 517 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 GPR89AB7ZAQ6 455 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 TAF4O00268 1085 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 NTN3O00634 580 aaPredicted RBP10.43□□□□□ -0.74
TPM4-209ENST00000588483 KRT86O43790 486 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 NOBOXO60393 691 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 GPR89BP0CG08 455 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 RBP3P10745 1247 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 MYF5P13349 255 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 HLA-DPA1P20036 260 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 RBL1P28749 1068 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 HMGCLP35914 325 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 WNT3AP56704 352 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 CLDN6P56747 220 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 PEX6Q13608 980 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 LRP8Q14114 963 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM4-209ENST00000588483 NR1D2Q14995 579 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 PYCR3Q53H96 274 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 PERM1Q5SV97 790 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 FAM182AQ5T1J6 154 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 CERCAMQ5T4B2 595 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 PID1Q7Z2X4 250 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 EFL1Q7Z2Z2 1120 aaKnown RBP10.43□□□□□ -0.74
TPM4-209ENST00000588483 MARCH9Q86YJ5 346 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 CDKL3Q8IVW4 592 aaPredicted RBP10.43□□□□□ -0.74
TPM4-209ENST00000588483 TTC13Q8NBP0 860 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 MAPK15Q8TD08 544 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
TPM4-209ENST00000588483 PLEKHG4BQ96PX9 1271 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 DEPDC7Q96QD5 511 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 FERMT1Q9BQL6 677 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 GORASP1Q9BQQ3 440 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 ZSCAN5AQ9BUG6 496 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 GSDMCQ9BYG8 508 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 FAM83DQ9H4H8 585 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 RMI1Q9H9A7 625 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 HACD3Q9P035 362 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 SUFUQ9UMX1 484 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 GPR34Q9UPC5 381 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 ZNF711Q9Y462 761 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 ST14Q9Y5Y6 855 aa10.43□□□□□ -0.74
TPM4-209ENST00000588483 ZNF106Q9H2Y7 1883 aaKnown RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 URB1O60287 2271 aaKnown RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 SRRM3A6NNA2 597 aaPredicted RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 FADS2P1A8MWK0 482 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 H7C0C1 242 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 NUDT21O43809 227 aaKnown RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 DNAJC6O75061 913 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 PMPCBO75439 489 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 ANXA9O76027 345 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 FGF1P05230 155 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 GLB1P16278 677 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 ADCY8P40145 1251 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 ATP5OP48047 213 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 EIF3EP60228 445 aaKnown RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 ILF3Q12906 894 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM4-209ENST00000588483 SLC1A5Q15758 541 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 PCSK7Q16549 785 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 C14orf28Q4W4Y0 310 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 ITPRIPL1Q6GPH6 555 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 CCDC70Q6NSX1 233 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 IGF2-ASQ6U949 168 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 ZNF438Q7Z4V0 828 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 TAF8Q7Z7C8 310 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 TRAM1L1Q8N609 369 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 GPR26Q8NDV2 337 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 CCL4L1Q8NHW4 92 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 PPP1R2P1Q96PQ5 205 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 VPS35Q96QK1 796 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 OR2M4Q96R27 311 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 C19orf43Q9BQ61 176 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 CCDC3Q9BQI4 270 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 UBP1Q9NZI7 540 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 PACSIN2Q9UNF0 486 aaPredicted RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 SPO11Q9Y5K1 396 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 OAS3Q9Y6K5 1087 aaKnown RBP10.42□□□□□ -0.74
TPM4-209ENST00000588483 UNC13CQ8NB66 2214 aa10.42□□□□□ -0.74
TPM4-209ENST00000588483 FAM208BQ5VWN6 2430 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms