RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 TAAR2Q9P1P5 351 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 LRIT1Q9P2V4 623 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 SATB2Q9UPW6 733 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 RGSL1A5PLK6 1076 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 RRP8O43159 456 aaKnown RBP17.59■□□□□ 0.41
TPM4-206ENST00000587201 PIRTP0C851 137 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 ADCY8P40145 1251 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 EIF2S3P41091 472 aaKnown RBP17.59■□□□□ 0.41
TPM4-206ENST00000587201 CTBSQ01459 385 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 HLTFQ14527 1009 aaKnown RBP eCLIP17.59■□□□□ 0.41
TPM4-206ENST00000587201 CERCAMQ5T4B2 595 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 ACRBPQ8NEB7 543 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 SNIP1Q8TAD8 396 aaKnown RBP17.59■□□□□ 0.41
TPM4-206ENST00000587201 TADA1Q96BN2 335 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 SCARF2Q96GP6 870 aaPredicted RBP17.59■□□□□ 0.41
TPM4-206ENST00000587201 COX14Q96I36 57 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 OR2M4Q96R27 311 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 WDR24Q96S15 920 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 HEMGNQ9BXL5 484 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 LRRN3Q9H3W5 708 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 UBP1Q9NZI7 540 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 KLHL8Q9P2G9 620 aaPredicted RBP17.59■□□□□ 0.41
TPM4-206ENST00000587201 SHOC2Q9UQ13 582 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 RNF215Q9Y6U7 377 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 DUSP10Q9Y6W6 482 aa17.59■□□□□ 0.41
TPM4-206ENST00000587201 MTSS1O43312 755 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 PMPCBO75439 489 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 SLC4A1P02730 911 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 FGF1P05230 155 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 PNLIPP16233 465 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 CTNNA1P35221 906 aaKnown RBP17.58■□□□□ 0.4
TPM4-206ENST00000587201 ACTR1BP42025 376 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 ABCG1P45844 678 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 ACTR1AP61163 376 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 WASHC5Q12768 1159 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 BIRC2Q13490 618 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 PEX6Q13608 980 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 PPP2R5EQ16537 467 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 HENMT1Q5T8I9 393 aaKnown RBP17.58■□□□□ 0.4
TPM4-206ENST00000587201 CCDC181Q5TID7 509 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 FOXR1Q6PIV2 292 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 GALNT13Q8IUC8 556 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 CCNJLQ8IV13 435 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 ZNF578Q96N58 590 aaPredicted RBP17.58■□□□□ 0.4
TPM4-206ENST00000587201 BAG1Q99933 345 aaPredicted RBP17.58■□□□□ 0.4
TPM4-206ENST00000587201 GPR63Q9BZJ6 419 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 MAGEE1Q9HCI5 957 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 APPL1Q9UKG1 709 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 REXO2Q9Y3B8 237 aaKnown RBP17.58■□□□□ 0.4
TPM4-206ENST00000587201 PLEKHM1Q9Y4G2 1056 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 PCDHA3Q9Y5H8 950 aa17.58■□□□□ 0.4
TPM4-206ENST00000587201 COL27A1Q8IZC6 1860 aaPredicted RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 A0A1W2PQM1 296 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 BTNL10A8MVZ5 291 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 FADS2P1A8MWK0 482 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 HACD1B0YJ81 288 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 APOC4-APOC2K7ER74 178 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 NUDT21O43809 227 aaKnown RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 ECEL1O95672 775 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 NDST3O95803 873 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 APOC2P02655 101 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 ATP1A1P05023 1023 aaKnown RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 NFKB1P19838 968 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 CD68P34810 354 aaPredicted RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 VAV2P52735 878 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 PDX1P52945 283 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 MAZP56270 477 aaKnown RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 COPS2P61201 443 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 PYCR3Q53H96 274 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 BBS12Q6ZW61 710 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 PID1Q7Z2X4 250 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 KIAA1328Q86T90 577 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 HTR3CQ8WXA8 447 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 EID2BQ96D98 161 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 QKIQ96PU8 341 aaKnown RBP eCLIP17.57■□□□□ 0.4
TPM4-206ENST00000587201 VAT1Q99536 393 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 SPATA16Q9BXB7 569 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 LACRTQ9GZZ8 138 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 FAM153AQ9UHL3 310 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 ZNHIT2Q9UHR6 403 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 CNOT6Q9ULM6 557 aaKnown RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 ZNF711Q9Y462 761 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 ST14Q9Y5Y6 855 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 OAS3Q9Y6K5 1087 aaKnown RBP17.57■□□□□ 0.4
TPM4-206ENST00000587201 ADAMTS20P59510 1910 aa17.57■□□□□ 0.4
TPM4-206ENST00000587201 CCDC187A0A096LP49 1063 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 CCDC66A2RUB6 948 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 RHPN2P1A8MT19 583 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 D6RAR5 112 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 F5H423 210 aaPredicted RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 H7C0C1 242 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 PJA2O43164 708 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 DXOO77932 396 aaKnown RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 ITPKBP27987 946 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 RBMS1P29558 406 aaKnown RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 TNNT3P45378 269 aaPredicted RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 ATP5OP48047 213 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 INHBCP55103 352 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 CCDC173Q0VFZ6 552 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms