RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PREPLQ4J6C6 727 aaPredicted RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 PPM1JQ5JR12 505 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 HECTD2Q5U5R9 776 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 AGAP9Q5VTM2 703 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 LYPLAL1Q5VWZ2 237 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 MBLAC2Q68D91 279 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 KLC3Q6P597 504 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CNSTQ6PJW8 725 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ZNF852Q6ZMS4 543 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 OTOAQ7RTW8 1153 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ERMP1Q7Z2K6 904 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CMC1Q7Z7K0 106 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 TBC1D1Q86TI0 1168 aaPredicted RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 ADIPOR2Q86V24 386 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CAMK1DQ8IU85 385 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 SLC41A1Q8IVJ1 513 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 KIAA2013Q8IYS2 634 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ZNF687Q8N1G0 1237 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 RYBPQ8N488 228 aaPredicted RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 PAF1Q8N7H5 531 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 GPATCH11Q8N954 259 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 OR13C4Q8NGS5 318 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 RIN3Q8TB24 985 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CCDC126Q96EE4 140 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 NELL2Q99435 816 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 OMDQ99983 421 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 SIKE1Q9BRV8 207 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 TM6SF2Q9BZW4 377 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CCDC68Q9H2F9 335 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ZFP14Q9HCL3 533 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 FBXO6Q9NRD1 293 aaPredicted RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 IL17CQ9P0M4 197 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 TMEM216Q9P0N5 145 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 COPG2Q9UBF2 871 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 FBXO4Q9UKT5 387 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 EMCNQ9ULC0 261 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ERVW-1Q9UQF0 538 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 RUVBL2Q9Y230 463 aaKnown RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 ZNF711Q9Y462 761 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 SPO11Q9Y5K1 396 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 WNT6Q9Y6F9 365 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 USH1CQ9Y6N9 552 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 TRIM13O60858 407 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 CYP17A1P05093 508 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 SERPINE1P05121 402 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 LTA4HP09960 611 aaKnown RBP10.36□□□□□ -0.75
LIG3-203ENST00000585370 CISD3P0C7P0 127 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 PIRTP0C851 137 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 SLC35E2BP0CK96 405 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 MYL2P10916 166 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 SLC8A1P32418 973 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 ADARP55265 1226 aaKnown RBP10.36□□□□□ -0.75
LIG3-203ENST00000585370 TAS2R39P59534 338 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 ST8SIA6P61647 398 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 CACNG1Q06432 222 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 IFT88Q13099 833 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 CHI3L2Q15782 390 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 GPR33Q49SQ1 333 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 GRAMD4Q6IC98 578 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 FOXR1Q6PIV2 292 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 BRAT1Q6PJG6 821 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 TSSK4Q6SA08 328 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 FAM47EQ6ZV65 393 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 USP45Q70EL2 814 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 CRLF3Q8IUI8 442 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 PPP4R1Q8TF05 950 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 ECHDC3Q96DC8 303 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 SCRN2Q96FV2 425 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 RPL10LQ96L21 214 aaKnown RBP10.36□□□□□ -0.75
LIG3-203ENST00000585370 MRPL57Q9BQC6 102 aaKnown RBP10.36□□□□□ -0.75
LIG3-203ENST00000585370 HEPHQ9BQS7 1158 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 OSBPL1AQ9BXW6 950 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 C12orf65Q9H3J6 166 aaKnown RBP10.36□□□□□ -0.75
LIG3-203ENST00000585370 CAB39LQ9H9S4 337 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 ZFYVE1Q9HBF4 777 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 SYTL2Q9HCH5 934 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 RAD18Q9NS91 495 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 SLC30A1Q9Y6M5 507 aa10.36□□□□□ -0.75
LIG3-203ENST00000585370 CAPN8A6NHC0 703 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 HEPACAM2A8MVW5 462 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 TMEM114B3SHH9 223 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 AURKAO14965 403 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SNNO75324 88 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 DCTN3O75935 186 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 PYGLP06737 847 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 DLDP09622 509 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 RALBP11234 206 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 CYP2A6P11509 494 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 PSMC3P17980 439 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SAT1P21673 171 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 FDXRP22570 491 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 VIPR2P41587 438 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SKIV2L2P42285 1042 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 PTGER3P43115 390 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 CTSOP43234 321 aaPredicted RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 MAGEA9P43362 315 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 RPS9P46781 194 aaKnown RBP10.35□□□□□ -0.75
LIG3-203ENST00000585370 NUMBP49757 651 aa10.35□□□□□ -0.75
LIG3-203ENST00000585370 SUOXP51687 545 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms