RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 GCATO75600 419 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 IPO7O95373 1038 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 NFATC1O95644 943 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 FGF19O95750 216 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CAVIN2O95810 425 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 STAG3L1P0CL83 205 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ERCC2P18074 760 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 KELP23276 732 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 MST1P26927 711 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ADORA2AP29274 412 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC5A2P31639 672 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SHMT1P34896 483 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 HSD17B4P51659 736 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 RPS6KA3P51812 740 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC15Q0P6D6 951 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SMARCB1Q12824 385 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CAMK2DQ13557 499 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TP53BP2Q13625 1128 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 GSTA3Q16772 222 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 KRT24Q2M2I5 525 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 AP5B1Q2VPB7 878 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 LETM2Q2VYF4 491 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF750Q32MQ0 723 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CD300EQ496F6 205 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 C9orf50Q5SZB4 431 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 RBM20Q5T481 1227 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TSTD2Q5T7W7 516 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 PLPPR4Q7Z2D5 763 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 GALNT13Q8IUC8 556 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC44A3Q8N4M1 653 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SPC24Q8NBT2 197 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ATP6V0A1Q93050 837 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 FKBP10Q96AY3 582 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM120BQ96EK7 910 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CEP95Q96GE4 821 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 PDLIM2Q96JY6 352 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC114Q96M63 670 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TWNKQ96RR1 684 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CDCA3Q99618 268 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 MTG1Q9BT17 334 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TLR10Q9BXR5 811 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TXLNGYQ9BZA5 131 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 NUF2Q9BZD4 464 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SPATC1LQ9H0A9 340 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 STN1Q9H668 368 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 PIH1D3Q9NQM4 214 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ENTPD7Q9NQZ7 604 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 NRBP2Q9NSY0 501 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ARHGEF38Q9NXL2 777 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 LCMT1Q9UIC8 334 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 R3HDM2Q9Y2K5 976 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC27A6Q9Y2P4 619 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SESN1Q9Y6P5 492 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ASTN2O75129 1339 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CYP3A7-CYP3A51PA0A087WV96 503 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 hCG_1809904A0A1W2PP81 198 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A1W2PPE2 198 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A1W2PR64 198 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 VWA3AA6NCI4 1184 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 M0QZ92 97 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CTDSP2O14595 271 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CPLX1O14810 134 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ZBTB43O43298 467 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CEP104O60308 925 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 USO1O60763 962 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 SEC14L2O76054 403 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 IGHDP01880 384 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 WNT1P04628 370 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 PORP16435 677 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CASTP20810 708 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CYP3A7P24462 503 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TMOD1P28289 359 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 FMO4P31512 558 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 MPLP40238 635 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 MAGEA9P43362 315 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CCT8P50990 548 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 DGKEP52429 567 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CDH8P55286 799 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 UFM1P61960 85 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 RPL7AP62424 266 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 YWHAZP63104 245 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 NUCB2P80303 420 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ARHGAP8P85298 464 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TFDP1Q14186 410 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CNGA3Q16281 694 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 PFKFB3Q16875 520 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ABLIM2Q6H8Q1 611 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CDC73Q6P1J9 531 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 C16orf54Q6UWD8 224 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ANKS1BQ7Z6G8 1248 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 GALNT5Q7Z7M9 940 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF410Q86VK4 478 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 CPOQ8IVL8 374 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 KLHL7Q8IXQ5 586 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 THNSL1Q8IYQ7 743 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 IZUMO1Q8IYV9 350 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM199Q8N511 208 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 LSMEM1Q8N8F7 131 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 GOLGA5Q8TBA6 731 aa1.97□□□□□ -2.09
SMCHD1-211ENST00000584897 MRPS27Q92552 414 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms