RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 TPK1Q9H3S4 243 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 DNMT3LQ9UJW3 386 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 PMF1-BGLAPU3KQ54 211 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ORC5O43913 435 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 NOS1APO75052 506 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 ATF6P18850 670 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 POLR2EP19388 210 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 BUD31P41223 144 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 HNF4AP41235 474 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ASMTP46597 345 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 SUZ12Q15022 739 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 PDCD4Q53EL6 469 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 TEX44Q53QW1 395 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 JOSD2Q8TAC2 188 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 LRTM1Q9HBL6 345 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 MAN2B2Q9Y2E5 1009 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 SLC28A2O43868 658 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 LYPLA2O95372 231 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 PGRP06401 933 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CSH1P0DML2 217 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CSH2P0DML3 217 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 PTX3P26022 381 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 MNDAP41218 407 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CDKN2BP42772 138 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 HUNKP57058 714 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 FKBP1AP62942 108 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 AP5B1Q2VPB7 878 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CERCAMQ5T4B2 595 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ARRDC4Q8NCT1 418 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 BCL2L14Q9BZR8 327 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ZDHHC6Q9H6R6 413 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 N6AMT1Q9Y5N5 214 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 URADA6NGE7 173 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CXCL11O14625 94 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 REM1O75628 298 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 LRATO95237 230 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 RLN1P04808 185 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ACTR3P61158 418 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CNSTQ6PJW8 725 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 SLC4A11Q8NBS3 891 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 DDX4Q9NQI0 724 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 TAS2R1Q9NYW7 299 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 CARD8Q9Y2G2 431 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 COL3A1P02461 1466 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 FADS2P1A8MWK0 482 aa13□□□□□ -0.33
RNF43-208ENST00000584437 DPEP1P16444 411 aa13□□□□□ -0.33
RNF43-208ENST00000584437 UBA1P22314 1058 aaKnown RBP13□□□□□ -0.33
RNF43-208ENST00000584437 PTGIRP43119 386 aa13□□□□□ -0.33
RNF43-208ENST00000584437 TAS2R41P59536 307 aa13□□□□□ -0.33
RNF43-208ENST00000584437 ALG11Q2TAA5 492 aa13□□□□□ -0.33
RNF43-208ENST00000584437 C4orf32Q8N8J7 132 aa13□□□□□ -0.33
RNF43-208ENST00000584437 COL26A1Q96A83 441 aa13□□□□□ -0.33
RNF43-208ENST00000584437 PCDHB1Q9Y5F3 818 aa13□□□□□ -0.33
RNF43-208ENST00000584437 WASF2Q9Y6W5 498 aa13□□□□□ -0.33
RNF43-208ENST00000584437 ADAMDEC1O15204 470 aa13□□□□□ -0.33
RNF43-208ENST00000584437 FAM155BO75949 473 aa13□□□□□ -0.33
RNF43-208ENST00000584437 NOL4O94818 638 aa13□□□□□ -0.33
RNF43-208ENST00000584437 CDH5P33151 784 aaPredicted RBP13□□□□□ -0.33
RNF43-208ENST00000584437 CAPSQ13938 189 aa13□□□□□ -0.33
RNF43-208ENST00000584437 DRICH1Q6PGQ1 229 aaPredicted RBP13□□□□□ -0.33
RNF43-208ENST00000584437 AHSA2Q719I0 299 aa13□□□□□ -0.33
RNF43-208ENST00000584437 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
RNF43-208ENST00000584437 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
RNF43-208ENST00000584437 TNFRSF11BO00300 401 aa13□□□□□ -0.33
RNF43-208ENST00000584437 TRBC1P01850 177 aa13□□□□□ -0.33
RNF43-208ENST00000584437 LGALS2P05162 132 aa13□□□□□ -0.33
RNF43-208ENST00000584437 PSEN2P49810 448 aa13□□□□□ -0.33
RNF43-208ENST00000584437 IDH3AP50213 366 aa13□□□□□ -0.33
RNF43-208ENST00000584437 ARHGDIBP52566 201 aa13□□□□□ -0.33
RNF43-208ENST00000584437 CDH4P55283 916 aa13□□□□□ -0.33
RNF43-208ENST00000584437 SWI5Q1ZZU3 235 aa13□□□□□ -0.33
RNF43-208ENST00000584437 VPS26BQ4G0F5 336 aa13□□□□□ -0.33
RNF43-208ENST00000584437 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
RNF43-208ENST00000584437 HECTD3Q5T447 861 aa13□□□□□ -0.33
RNF43-208ENST00000584437 FKBP1CQ5VVH2 108 aa13□□□□□ -0.33
RNF43-208ENST00000584437 LLGL2Q6P1M3 1020 aa13□□□□□ -0.33
RNF43-208ENST00000584437 UNC5BQ8IZJ1 945 aa13□□□□□ -0.33
RNF43-208ENST00000584437 VGLL2Q8N8G2 317 aa13□□□□□ -0.33
RNF43-208ENST00000584437 BANPQ8N9N5 519 aa13□□□□□ -0.33
RNF43-208ENST00000584437 CSPG4P5Q96PW8 444 aa13□□□□□ -0.33
RNF43-208ENST00000584437 COPS8Q99627 209 aa13□□□□□ -0.33
RNF43-208ENST00000584437 THG1LQ9NWX6 298 aaKnown RBP13□□□□□ -0.33
RNF43-208ENST00000584437 SUCOQ9UBS9 1254 aaKnown RBP13□□□□□ -0.33
RNF43-208ENST00000584437 PCDHGA4Q9Y5G9 962 aa13□□□□□ -0.33
RNF43-208ENST00000584437 MOXD2PA6NHM9 499 aa13□□□□□ -0.33
RNF43-208ENST00000584437 A8MX80 341 aa13□□□□□ -0.33
RNF43-208ENST00000584437 NPHS1O60500 1241 aa13□□□□□ -0.33
RNF43-208ENST00000584437 FGBP02675 491 aa13□□□□□ -0.33
RNF43-208ENST00000584437 MC4RP32245 332 aa13□□□□□ -0.33
RNF43-208ENST00000584437 PFKPQ01813 784 aa13□□□□□ -0.33
RNF43-208ENST00000584437 ACAP2Q15057 778 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms