RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 TUBA4AP68366 448 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 RPP38P78345 283 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CEACAM7Q14002 265 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GRM3Q14832 879 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LHX8Q68G74 356 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SIGIRRQ6IA17 410 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LRRC8BQ6P9F7 803 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 AMIGO2Q86SJ2 522 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DENND6AQ8IWF6 608 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 METTL25Q8N6Q8 603 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NPY6RQ99463 290 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PKP2Q99959 881 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MLPHQ9BV36 600 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DUSP16Q9BY84 665 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TNKS2Q9H2K2 1166 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 WASH6PQ9NQA3 447 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 A0A0U1RQF3 1178 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 XPO1O14980 1071 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CBFA2T3O75081 653 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 RETP07949 1114 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FDFT1P37268 417 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PBX3P40426 434 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CXCR3P49682 368 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CHN2P52757 468 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CCL23P55773 120 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 YBEYP58557 167 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MLC1Q15049 377 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MINDY4Q4G0A6 757 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 STEAP4Q687X5 459 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 B3GNT6Q6ZMB0 384 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ZBTB46Q86UZ6 589 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SLC41A1Q8IVJ1 513 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TTC16Q8NEE8 873 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SLC47A1Q96FL8 570 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LRGUKQ96M69 825 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TMEM209Q96SK2 561 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GBA3Q9H227 469 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NMRAL1Q9HBL8 299 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DDIT4Q9NX09 232 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 VANGL2Q9ULK5 521 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 RUVBL2Q9Y230 463 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CROCCQ5TZA2 2017 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FAM221AA4D161 298 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 OR6C65A6NJZ3 312 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DCLK1O15075 740 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GMNNO75496 209 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CRTAMO95727 393 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SRGAP2BP0DMP2 458 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ALOX12P18054 663 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NFKB1P19838 968 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 RPIAP49247 311 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CYP4F8P98187 520 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MGAT3Q09327 533 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MBTPS1Q14703 1052 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 POU6F1Q14863 301 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ODF1Q14990 250 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NADK2Q4G0N4 442 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NOMO2Q5JPE7 1267 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MAP3K21Q5TCX8 1036 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SLC6A19Q695T7 634 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 EPGNQ6UW88 154 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 UGT2A3Q6UWM9 527 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 STRADAQ7RTN6 431 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 KBTBD6Q86V97 674 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ZNF280BQ86YH2 543 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 RNF34Q969K3 372 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PCED1BQ96HM7 432 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SCLYQ96I15 445 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ARL5BQ96KC2 179 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PPP1R14DQ9NXH3 145 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 AP4B1Q9Y6B7 739 aa11.59□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ATP6AP2A0A1C7CYW4 349 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ATP6AP2O75787 350 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ALDH1A2O94788 518 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MT-CYBP00156 380 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 JCHAINP01591 159 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PCSK6P29122 969 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ADSLP30566 484 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ARPP19P56211 112 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MPP1Q00013 466 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 USP10Q14694 798 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ANKRD20A4Q4UJ75 823 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TPGS2Q68CL5 300 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 DEFB128Q7Z7B8 93 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PQLC1Q8N2U9 271 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 B3GALT6Q96L58 329 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF512Q96ME7 567 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 KLHL32Q96NJ5 620 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SIK2Q9H0K1 926 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 IL1RL2Q9HB29 575 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GDAP2Q9NXN4 497 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 DMTF1Q9Y222 760 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 C9IYK1 514 aa11.58□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CCL22O00626 93 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms