RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ATP13A3Q9H7F0 1226 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 L2HGDHQ9H9P8 463 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 LRRK2Q5S007 2527 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 CFAP69A5D8W1 941 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 TNFRSF10CO14798 259 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 B4GAT1O43505 415 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 CEP104O60308 925 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 KRT1P04264 644 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 ELFN1P0C7U0 828 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 CCL4P13236 92 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 SERPINA4P29622 427 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 MAZP56270 477 aaKnown RBP20.46■□□□□ 0.87
SRSF1-206ENST00000583741 CLCA4Q14CN2 919 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 WHAMMP3Q1A5X7 153 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 ATP13A4Q4VNC1 1196 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 ODF2Q5BJF6 829 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 JPH3Q8WXH2 748 aaPredicted RBP20.46■□□□□ 0.87
SRSF1-206ENST00000583741 NSMCE3Q96MG7 304 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 WDR26Q9H7D7 661 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 GPATCH2LQ9NWQ4 482 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 PCDHB11Q9Y5F2 797 aa20.46■□□□□ 0.87
SRSF1-206ENST00000583741 A8MX80 341 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 CPNE6O95741 557 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 HOXC4P09017 264 aaPredicted RBP20.45■□□□□ 0.86
SRSF1-206ENST00000583741 KELP23276 732 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 CSNK1DP48730 415 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 ARSDP51689 593 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 AIF1P55008 147 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 OR1D5P58170 312 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 BOLA3Q53S33 107 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 SEL1L2Q5TEA6 688 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 CCDC181Q5TID7 509 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 AFMIDQ63HM1 303 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 CYP4V2Q6ZWL3 525 aaPredicted RBP20.45■□□□□ 0.86
SRSF1-206ENST00000583741 ZSCAN1Q8NBB4 408 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 EXD1Q8NHP7 514 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 TEKT4Q8WW24 435 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 PMEPA1Q969W9 287 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 SLC39A8Q9C0K1 460 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 SPATS2LQ9NUQ6 558 aaKnown RBP20.45■□□□□ 0.86
SRSF1-206ENST00000583741 MOSPD1Q9UJG1 213 aa20.45■□□□□ 0.86
SRSF1-206ENST00000583741 PRSS38A1L453 326 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 ZRANB2O95218 330 aaKnown RBP eCLIP20.44■□□□□ 0.866e-7■■□□□ 12.2
SRSF1-206ENST00000583741 RARAP10276 462 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 PYGMP11217 842 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 CD82P27701 267 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 PAPOLAP51003 745 aaKnown RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 NDST2P52849 883 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 TPI1P60174 286 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 AMZ1Q400G9 498 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 ZNF574Q6ZN55 896 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 DPPA4Q7L190 304 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 ZNF438Q7Z4V0 828 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 C17orf82Q86X59 251 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 CREG2Q8IUH2 290 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 CCDC50Q8IVM0 306 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 RCBTB1Q8NDN9 531 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 HSPH1Q92598 858 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 RBM41Q96IZ5 413 aaKnown RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 NUDT22Q9BRQ3 303 aa20.44■□□□□ 0.86
SRSF1-206ENST00000583741 SNRNP25Q9BV90 132 aaKnown RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 SUDS3Q9H7L9 328 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 SPENQ96T58 3664 aaKnown RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 ZFC3H1O60293 1989 aaKnown RBP20.44■□□□□ 0.86
SRSF1-206ENST00000583741 LRRD1A4D1F6 860 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 TRAFD1O14545 582 aaPredicted RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 FUCA1P04066 466 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 SFTPCP11686 197 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 ERMARDQ5T6L9 678 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 PNCKQ6P2M8 343 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 PIM3Q86V86 326 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 NRROSQ86YC3 692 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 GPBAR1Q8TDU6 330 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 MS4A14Q96JA4 679 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 CARS2Q9HA77 564 aaKnown RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 RNF14Q9UBS8 474 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 NBASA2RRP1 2371 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 PGRMC1O00264 195 aaKnown RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 PPFIA2O75334 1257 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 CCNB1P14635 433 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 CETN2P41208 172 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 PAFAH1B1P43034 410 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 CKAP4Q07065 602 aaKnown RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 BCL2L1Q07817 233 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 SRSF1Q07955 248 aaKnown RBP eCLIP20.43■□□□□ 0.861e-10■■■□□ 18.1
SRSF1-206ENST00000583741 CA9Q16790 459 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 AADACL2Q6P093 401 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 ARHGAP36Q6ZRI8 547 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 ARHGAP12Q8IWW6 846 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 KCTD6Q8NC69 237 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 PTCD2Q8WV60 388 aaKnown RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 RNF25Q96BH1 459 aaPredicted RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 CINPQ9BW66 212 aaPredicted RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 B3GNT4Q9C0J1 378 aa20.43■□□□□ 0.86
SRSF1-206ENST00000583741 GEMIN8Q9NWZ8 242 aaKnown RBP20.43■□□□□ 0.86
SRSF1-206ENST00000583741 AP4E1Q9UPM8 1137 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms