RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RFTN1Q14699 578 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-215ENST00000583328 TRIM72Q6ZMU5 477 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 Q6ZVL8 140 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 MARK2Q7KZI7 788 aaKnown RBP12.23□□□□□ -0.45
TOP3A-215ENST00000583328 HSD11B1LQ7Z5J1 315 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 SFRP1Q8N474 314 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 RNF214Q8ND24 703 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 CPT1CQ8TCG5 803 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 RNF31Q96EP0 1072 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 SCARF2Q96GP6 870 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-215ENST00000583328 NSMCE3Q96MG7 304 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 STN1Q9H668 368 aaKnown RBP12.23□□□□□ -0.45
TOP3A-215ENST00000583328 NOCTQ9UK39 431 aaKnown RBP12.23□□□□□ -0.45
TOP3A-215ENST00000583328 CROTQ9UKG9 612 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 TLK1Q9UKI8 766 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 PCDHGC4Q9Y5F7 938 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 RP1L1Q8IWN7 2480 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-215ENST00000583328 UNC79Q9P2D8 2635 aa12.23□□□□□ -0.45
TOP3A-215ENST00000583328 ANKRD36A6QL64 1941 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 A0A1B0GTH6 734 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 A1L4Q6 167 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 TTC24A2A3L6 582 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 CDC14CA4D256 554 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 CPP00450 1065 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 CALB1P05937 261 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 ZNF143P52747 638 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 GSCP56915 257 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 FANCCQ00597 558 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 UBXN1Q04323 297 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 FOXM1Q08050 763 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 IL10RBQ08334 325 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 PYCR3Q53H96 274 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 GALNT13Q8IUC8 556 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 CBARPQ8N350 705 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 SH3KBP1Q96B97 665 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 ERGIC2Q96RQ1 377 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 ULBP3Q9BZM4 244 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 RTN4Q9NQC3 1192 aaKnown RBP12.22□□□□□ -0.45
TOP3A-215ENST00000583328 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 PHTF1Q9UMS5 762 aa12.22□□□□□ -0.45
TOP3A-215ENST00000583328 PSMD11O00231 422 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 EEF2KO00418 725 aaKnown RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 HTRA2O43464 458 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 SOCS5O75159 536 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 SEMA7AO75326 666 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 ASMTLO95671 621 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 FURINP09958 794 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 UNGP13051 313 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 DESP17661 470 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 LHCGRP22888 699 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 DPTQ07507 201 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 LRP8Q14114 963 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 LBRQ14739 615 aaKnown RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 SYCP1Q15431 976 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 DNAJC24Q6P3W2 148 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 ARHGAP36Q6ZRI8 547 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 SLC9B2Q86UD5 537 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 TRIM74Q86UV6 250 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 C3orf20Q8ND61 904 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 FNIP1Q8TF40 1166 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 MCEEQ96PE7 176 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 PSKH2Q96QS6 385 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 PCDHB18PQ96TA0 734 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 CNPY3Q9BT09 278 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 DHX35Q9H5Z1 703 aaKnown RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 SARS2Q9NP81 518 aaKnown RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 CUEDC1Q9NWM3 386 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-215ENST00000583328 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 CD84Q9UIB8 345 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 KCND3Q9UK17 655 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 SIK3Q9Y2K2 1263 aa12.21□□□□□ -0.45
TOP3A-215ENST00000583328 PIPSLA2A3N6 862 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 EML2O95834 649 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 ZNF28P17035 718 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 ERCC2P18074 760 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 SOX5P35711 763 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 PMS2P54278 862 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 EPHA4P54764 986 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 UBASH3AP57075 661 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 RPL7AP62424 266 aaKnown RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 ZNF235Q14590 738 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 PTPRRQ15256 657 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 TMCO4Q5TGY1 634 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 DCUN1D2Q6PH85 259 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 ADAMTSL4Q6UY14 1074 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 RFLNAQ6ZTI6 216 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 TECPR1Q7Z6L1 1165 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 TMEM135Q86UB9 458 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 TSPAN33Q86UF1 283 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 PHF13Q86YI8 300 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-215ENST00000583328 PLXDC1Q8IUK5 500 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 ARHGAP12Q8IWW6 846 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
TOP3A-215ENST00000583328 AP2M1Q96CW1 435 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms