RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SEZ6LQ9BYH1 1024 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 A0A0U1RQJ8 604 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 B4DLN1 442 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 M0QZ24 198 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 GPC4O75487 556 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 NTN1O95631 604 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 UBA1P22314 1058 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 HOXC9P31274 260 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 MRPL12P52815 198 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 HNRNPH2P55795 449 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 PSMC6P62333 389 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 FOXM1Q08050 763 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 AIMP2Q13155 320 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 SOWAHCQ53LP3 525 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 ZNF280DQ6N043 979 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 RGMBQ6NW40 437 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 C16orf54Q6UWD8 224 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 BEST3Q8N1M1 668 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 FAM216AQ8WUB2 273 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 RHBDF1Q96CC6 855 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 EGLN2Q96KS0 407 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 NEUROD6Q96NK8 337 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 CMKLR1Q99788 373 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 CENPOQ9BU64 300 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 MTMR10Q9NXD2 777 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 SUCLA2Q9P2R7 463 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 RPS6KA6Q9UK32 745 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 CMAHPQ9Y471 501 aa5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 TRIP12Q14669 1992 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-219ENST00000583294 OGG1O15527 345 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 CLDN14O95500 239 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ICAM1P05362 532 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 TUBBP07437 444 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ZNF12P17014 697 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 PON1P27169 355 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 PDLIM4P50479 330 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 MFAP4P55083 255 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 MRPS34P82930 218 aaKnown RBP5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 LRMPQ12912 555 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 TRAF2Q12933 501 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 MYBPHQ13203 477 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ATP13A5Q4VNC0 1218 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ZNF805Q5CZA5 627 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 PLEKHS1Q5SXH7 462 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 CFAP58Q5T655 872 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 RHBDF2Q6PJF5 856 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ENOSF1Q7L5Y1 443 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 IQCF1Q8N6M8 205 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 PCDH20Q8N6Y1 951 aaKnown RBP5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 SCMH1Q96GD3 660 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ZNF479Q96JC4 524 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 C3orf30Q96M34 536 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 OR1F2PQ96R84 312 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 LTB4R2Q9NPC1 389 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 FBXW11Q9UKB1 542 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 TMEM5Q9Y2B1 443 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 RABGAP1Q9Y3P9 1069 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 ARHGEF40Q8TER5 1519 aa5.57□□□□□ -1.52
SMARCE1-219ENST00000583294 CTDSP2O14595 271 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 SPINT2O43291 252 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 BEST1O76090 585 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 STARD3NLO95772 234 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 HIST1H2ABP04908 130 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 NGFRP08138 427 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 IGHV4-30-4P0DP06 118 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 SNHG28P0DPA3 235 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 HIST1H2ADP20671 130 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 ACADLP28330 430 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 EPS8Q12929 822 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 PCGF3Q3KNV8 242 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 KCNT1Q5JUK3 1230 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 DCST1Q5T197 706 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 BRINP3Q76B58 766 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 HIST3H2AQ7L7L0 130 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 HM13Q8TCT9 377 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 ELP5Q8TE02 316 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 JAKMIP2Q96AA8 810 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 PHF21BQ96EK2 531 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 SMC6Q96SB8 1091 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 FIZ1Q96SL8 496 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 PCYT2Q99447 389 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 ZPBPQ9BS86 351 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 SPRY4Q9C004 299 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 PAG1Q9NWQ8 432 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 STK39Q9UEW8 545 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 ACSL5Q9ULC5 683 aa5.56□□□□□ -1.52
SMARCE1-219ENST00000583294 A8MV72 311 aaPredicted RBP5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 DAB1O75553 588 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 KDM4BO94953 1096 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 SRCP12931 536 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 RRM1P23921 792 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 EIF2DP41214 584 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 MSH2P43246 934 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 SLC15A1P46059 708 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 PEX5P50542 639 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 EGR4Q05215 589 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 LTBQ06643 244 aa5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 GRSF1Q12849 480 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMARCE1-219ENST00000583294 MAD2L1Q13257 205 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms