RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 FADS2P1A8MWK0 482 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 AURKAO14965 403 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 ZSCAN12O43309 604 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 LIASO43766 372 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 DKK1O94907 266 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 CEACAM5P06731 702 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 CKMT1AP12532 417 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 ACP1P24666 158 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 CXCR5P32302 372 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 GNPDA1P46926 289 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 DUSP3P51452 185 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 GDF10P55107 478 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 ILKQ13418 452 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 OLIG2Q13516 323 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 SNX1Q13596 522 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 NR0B2Q15466 257 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 MARK2Q7KZI7 788 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 GLT6D1Q7Z4J2 308 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 TAF8Q7Z7C8 310 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 TAB3Q8N5C8 712 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 FAM181AQ8N9Y4 354 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 GPR26Q8NDV2 337 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 C1orf54Q8WWF1 131 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 FRMD8P1Q9BZ68 369 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 TMEM168Q9H0V1 697 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 BPIFA1Q9NP55 256 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 NCKIPSDQ9NZQ3 722 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 HACD3Q9P035 362 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 SIRPGQ9P1W8 387 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 GULP1Q9UBP9 304 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 TMEM98Q9Y2Y6 226 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 NEUROG3Q9Y4Z2 214 aa12.53□□□□□ -0.4
SMARCE1-218ENST00000582955 LY6G6EA0A0G2JKS1 128 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 CEP104O60308 925 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 USP12O75317 370 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 CDK4P11802 303 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 BPIP17213 487 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 RPIAP49247 311 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 DCDC1P59894 354 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 SPARCL1Q14515 664 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 ZNF569Q5MCW4 686 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 LVRNQ6Q4G3 990 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 SLC35F3Q8IY50 421 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 SDR16C5Q8N3Y7 309 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 FAM46DQ8NEK8 389 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 PTCD2Q8WV60 388 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 COX14Q96I36 57 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 BOCQ9BWV1 1114 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 CDH19Q9H159 772 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 TRMT1Q9NXH9 659 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 GPR34Q9UPC5 381 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 SLC17A4Q9Y2C5 497 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 GPSM3Q9Y4H4 160 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 U3KQA8 63 aa12.52□□□□□ -0.41
SMARCE1-218ENST00000582955 B4DGG1 531 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 BUD23O43709 281 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 METTL18O95568 372 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 IFNB1P01574 187 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 FGGP02679 453 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 FUCA1P04066 466 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 ATP1A1P05023 1023 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 IVLP07476 585 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 ADRA1AP35348 466 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 ACTN2P35609 894 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 HMGCLP35914 325 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 CLDN6P56747 220 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 ILF3Q12906 894 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 OASLQ15646 514 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 P3H1Q32P28 736 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 GUSBP11Q6P575 273 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 RANBP10Q6VN20 620 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 TMPRSS7Q7RTY8 843 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 EFL1Q7Z2Z2 1120 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 TTC30BQ8N4P2 665 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 TRAM1L1Q8N609 369 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 ARL10Q8N8L6 244 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 KYQ8NBH2 561 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 CCL4L1Q8NHW4 92 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 IFI44Q8TCB0 444 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 OR2M4Q96R27 311 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 TBL1YQ9BQ87 522 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 GSDMCQ9BYG8 508 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 DPEP2Q9H4A9 486 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 ARFGAP3Q9NP61 516 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 TRNAU1APQ9NX07 287 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 NFKBIL1Q9UBC1 381 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms