RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 HS6ST2Q96MM7 605 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 FAM111AQ96PZ2 611 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 GAL3ST4Q96RP7 486 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 SH3GL2Q99962 352 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 DPCDQ9BVM2 203 aaPredicted RBP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 FAM129AQ9BZQ8 928 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 TRIM31Q9BZY9 425 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 CPNE5Q9HCH3 593 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 ASAH2Q9NR71 780 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 C20orf141Q9NUB4 165 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 BABAM1Q9NWV8 329 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 AATFQ9NY61 560 aaKnown RBP eCLIP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 WSB2Q9NYS7 404 aaPredicted RBP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 NINJ2Q9NZG7 142 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 VPS18Q9P253 973 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 CGNQ9P2M7 1197 aaKnown RBP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 HSPB7Q9UBY9 170 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 FETUBQ9UGM5 382 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 APPL1Q9UKG1 709 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 HPCAL4Q9UM19 191 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 A4GNTQ9UNA3 340 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 AURKCQ9UQB9 309 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 COPG1Q9Y678 874 aaKnown RBP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 COL16A1Q07092 1604 aaPredicted RBP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 ABCC1P33527 1531 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 BLMP54132 1417 aaPredicted RBP3.18□□□□□ -1.9
KPNB1-208ENST00000580019 KIF27Q86VH2 1401 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 ATP8B3O60423 1300 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 SPATA31A3Q5VYP0 1347 aa3.18□□□□□ -1.9
KPNB1-208ENST00000580019 IQGAP1P46940 1657 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 GOLGA3Q08378 1498 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 LRRC9Q6ZRR7 1453 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 XIRP1Q702N8 1843 aaKnown RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 LOC102723996A0A087X1L8 192 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 NPIPB13A6NJU9 1138 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ENO4A6NNW6 628 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 NPIPB5A8MRT5 1133 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 NPIPB4C9JG80 1138 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 USP17L23D6RBM5 183 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PSMD9O00233 223 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 QSOX1O00391 747 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CEP104O60308 925 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TSC22D2O75157 780 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 GPC4O75487 556 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CSF1RP07333 972 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ZFYP08048 801 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 SFTPCP11686 197 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 FCER1AP12319 257 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PEPDP12955 493 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PDGFRAP16234 1089 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 FERP16591 822 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ZFXP17010 805 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 WT1P19544 449 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PON1P27169 355 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 POU1F1P28069 291 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ADORA2AP29274 412 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ADSSP30520 456 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 GJC1P36383 396 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PRKCIP41743 596 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TAS2R50P59544 299 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TFAP4Q01664 338 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CYP4A11Q02928 519 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 RUNX2Q13950 521 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PDK1Q15118 436 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 RPS6KA1Q15418 735 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TRADDQ15628 312 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 NAB2Q15742 525 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PROSER3Q2NL68 480 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ASTE1Q2TB18 679 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CCDC40Q4G0X9 1142 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 NOMO2Q5JPE7 1267 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM270Q6UE05 265 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 C16orf89Q6UX73 402 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 RGS9BPQ6ZS82 235 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 SPATA21Q7Z572 469 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 DSG4Q86SJ6 1040 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM200AQ86VY9 491 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 DZIP1Q86YF9 867 aaKnown RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 MFN1Q8IWA4 741 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 GUF1Q8N442 669 aaKnown RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 AFAP1Q8N556 730 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 METTL25Q8N6Q8 603 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 NSUN7Q8NE18 718 aaKnown RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 GMCL1P1Q8NEA9 526 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 SRFBP1Q8NEF9 429 aaKnown RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 RASSF8Q8NHQ8 419 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CEP76Q8TAP6 659 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PTPMT1Q8WUK0 201 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 GLMPQ8WWB7 406 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PRCCQ92733 491 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 ARSGQ96EG1 525 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 HMCESQ96FZ2 354 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 EEF2KMTQ96G04 330 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 OR2A14Q96R47 310 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CTAGE1Q96RT6 745 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PARK7Q99497 189 aaKnown RBP3.17□□□□□ -1.9
KPNB1-208ENST00000580019 PKP4Q99569 1192 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 C17orf80Q9BSJ5 609 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 CRACR2AQ9BSW2 395 aa3.17□□□□□ -1.9
KPNB1-208ENST00000580019 TCHPQ9BT92 498 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms