RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	TRMT1	Q9NXH9	659 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CYP39A1	Q9NYL5	469 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	KL	Q9UEF7	1012 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	POLG2	Q9UHN1	485 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	XPO7	Q9UIA9	1087 aa	Known RBP	4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	ADAM21	Q9UKJ8	722 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	ARHGAP26	Q9UNA1	814 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	RCE1	Q9Y256	329 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	TNFSF13B	Q9Y275	285 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	JRKL	Q9Y4A0	524 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	N6AMT1	Q9Y5N5	214 aa		4.15	□□□□□ -1.75
MSI2-211	ENST00000579531	CIT	O14578	2027 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SI	P14410	1827 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	LTBP2	Q14767	1821 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531		A0A1W2PRQ8	180 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	KCNJ18	B7U540	433 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	TISP43	B9A030	160 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	LAD1	O00515	517 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	MEIS2	O14770	477 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SYN3	O14994	580 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	INPPL1	O15357	1258 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ERLIN1	O75477	346 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	KAT7	O95251	611 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	MMP1	P03956	469 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	GOLGA8H	P0CJ92	632 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	GCFC2	P16383	781 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNF24	P17028	368 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PSMA3	P25788	255 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PSMA4	P25789	261 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	U2AF2	P26368	475 aa	Known RBP eCLIP	4.14	□□□□□ -1.75	1e-15	■□□□□ 10.9
MSI2-211	ENST00000579531	ICAM3	P32942	547 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	CIITA	P33076	1130 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RDX	P35241	583 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC16A2	P36021	539 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PAFAH1B1	P43034	410 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RXRG	P48443	463 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RPS6	P62753	249 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	UBXN2A	P68543	259 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RPP30	P78346	268 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	NUCB2	P80303	420 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ARHGAP8	P85298	464 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	COX10	Q12887	443 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	GAB1	Q13480	694 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	KPNB1	Q14974	876 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	STXBP2	Q15833	593 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	NFIL3	Q16649	462 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PRAMEF17	Q5VTA0	474 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	HHAT	Q5VTY9	493 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	GJB7	Q6PEY0	223 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	INO80C	Q6PI98	192 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SASS6	Q6UVJ0	657 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RBM44	Q6ZP01	1051 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	C4orf50	Q6ZRC1	276 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	AMIGO2	Q86SJ2	522 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	KLB	Q86Z14	1044 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PNLDC1	Q8NA58	520 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ANKRD20A12P	Q8NF67	263 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SEMA6D	Q8NFY4	1073 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	HASPIN	Q8TF76	798 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PIGK	Q92643	395 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	STAM	Q92783	540 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	KCNJ9	Q92806	393 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RNF125	Q96EQ8	232 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	C5orf34	Q96MH7	638 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	FRG2B	Q96QU4	278 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	CADM1	Q9BY67	442 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	LRRC2	Q9BYS8	371 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	XPO4	Q9C0E2	1151 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	NACA2	Q9H009	215 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PAIP1	Q9H074	479 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	INTS2	Q9H0H0	1204 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PCED1A	Q9H1Q7	454 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PORCN	Q9H237	461 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	TTC12	Q9H892	705 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RAVER2	Q9HCJ3	691 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ASB6	Q9NWX5	421 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	OGFR	Q9NZT2	677 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	ORC3	Q9UBD5	711 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SERGEF	Q9UGK8	458 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC8A2	Q9UPR5	921 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	RIPK3	Q9Y572	518 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	DMRT1	Q9Y5R6	373 aa		4.14	□□□□□ -1.75
MSI2-211	ENST00000579531	PDCD11	Q14690	1871 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	CENPF	P49454	3210 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	MICAL3	Q7RTP6	2002 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531		A0A087X0M5	115 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531		A0A1B0GX30	115 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	SMCO2	A6NFE2	343 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	LINC01548	A6NM66	108 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	KRTAP9-7	A8MTY7	169 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	BOLA2-SMG1P6	H3BVE0	249 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	DUSP11	O75319	330 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	PLEKHA8P1	O95397	391 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	CTDNEP1	O95476	244 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	BMP15	O95972	392 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	CHRM4	P08173	479 aa		4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	CYP2A6	P11509	494 aa	Predicted RBP	4.13	□□□□□ -1.75
MSI2-211	ENST00000579531	FDPS	P14324	419 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms