RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TAF4O00268 1085 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 PMPCBO75439 489 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 TCEA3O75764 348 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 TJP3O95049 919 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 FUCA1P04066 466 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 NFKB1P19838 968 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 ATP5OP48047 213 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 OTUD4Q01804 1114 aaKnown RBP14.76□□□□□ -0.05
SS18-212ENST00000579061 CYP4F3Q08477 520 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 ILF3Q12906 894 aaKnown RBP eCLIP14.76□□□□□ -0.05
SS18-212ENST00000579061 MPP3Q13368 585 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 PCSK7Q16549 785 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 PERM1Q5SV97 790 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 KDELC1Q6UW63 502 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 LYSMD3Q7Z3D4 306 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 TMC3Q7Z5M5 1100 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 KYQ8NBH2 561 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 FAM46DQ8NEK8 389 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 ACTL9Q8TC94 416 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 AGAP2Q99490 1192 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 HERPUD2Q9BSE4 406 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 DESI2Q9BSY9 194 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 TSGA10Q9BZW7 698 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 SIRPGQ9P1W8 387 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 NOBOXO60393 691 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 PYGMP11217 842 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 PNLIPP16233 465 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 RBL1P28749 1068 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 TNNT3P45378 269 aaPredicted RBP14.75□□□□□ -0.05
SS18-212ENST00000579061 GNPDA1P46926 289 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 POLD2P49005 469 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 WNT3AP56704 352 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 TCEA2Q15560 299 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 FAM182AQ5T1J6 154 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 PDPK2PQ6A1A2 396 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 ITPRIPL1Q6GPH6 555 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 KDELC2Q7Z4H8 507 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 NRROSQ86YC3 692 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 CDKL3Q8IVW4 592 aaPredicted RBP14.75□□□□□ -0.05
SS18-212ENST00000579061 CCL4L1Q8NHW4 92 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 EID2BQ96D98 161 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 MRGPRX2Q96LB1 330 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 CCDC3Q9BQI4 270 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 GPR63Q9BZJ6 419 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 TRABDQ9H4I3 376 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 VPS18Q9P253 973 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 TRIM10Q9UDY6 481 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 CNOT6Q9ULM6 557 aaKnown RBP14.75□□□□□ -0.05
SS18-212ENST00000579061 ZNF711Q9Y462 761 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 ADGRG1Q9Y653 693 aa14.75□□□□□ -0.05
SS18-212ENST00000579061 NTN3O00634 580 aaPredicted RBP14.74□□□□□ -0.05
SS18-212ENST00000579061 ARHGAP6O43182 974 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 KRT86O43790 486 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 CSO75390 466 aaKnown RBP14.74□□□□□ -0.05
SS18-212ENST00000579061 RBP3P10745 1247 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 GLB1P16278 677 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 HLA-DPA1P20036 260 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 ADCY8P40145 1251 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 EIF3EP60228 445 aaKnown RBP14.74□□□□□ -0.05
SS18-212ENST00000579061 HLTFQ14527 1009 aaKnown RBP eCLIP14.74□□□□□ -0.05
SS18-212ENST00000579061 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 C14orf28Q4W4Y0 310 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 PYCR3Q53H96 274 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 CERCAMQ5T4B2 595 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 DOK6Q6PKX4 331 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 RBM44Q6ZP01 1051 aaKnown RBP14.74□□□□□ -0.05
SS18-212ENST00000579061 TTC13Q8NBP0 860 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 CCDC74AQ96AQ1 378 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 OXNAD1Q96HP4 312 aaPredicted RBP14.74□□□□□ -0.05
SS18-212ENST00000579061 HES6Q96HZ4 224 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 OR2M4Q96R27 311 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 ZSCAN5AQ9BUG6 496 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 GBA3Q9H227 469 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 DPEP2Q9H4A9 486 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 RMI1Q9H9A7 625 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 UBP1Q9NZI7 540 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 HACD3Q9P035 362 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 RSPH14Q9UHP6 348 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 APPL1Q9UKG1 709 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 SHOC2Q9UQ13 582 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 TMEM98Q9Y2Y6 226 aa14.74□□□□□ -0.05
SS18-212ENST00000579061 A0A0U1RQJ8 604 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 GOLGA6L9A6NEM1 432 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 FADS2P1A8MWK0 482 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 B4DGG1 531 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 INPP4BO15327 924 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 DDX3YO15523 660 aaKnown RBP14.73□□□□□ -0.05
SS18-212ENST00000579061 NUDT21O43809 227 aaKnown RBP14.73□□□□□ -0.05
SS18-212ENST00000579061 ANXA9O76027 345 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 STK10O94804 968 aaKnown RBP14.73□□□□□ -0.05
SS18-212ENST00000579061 ASMTLO95671 621 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 FGF1P05230 155 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 PIRTP0C851 137 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 HMGCLP35914 325 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 GEMP55040 296 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 CTBSQ01459 385 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 LRP8Q14114 963 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 SLC1A5Q15758 541 aa14.73□□□□□ -0.05
SS18-212ENST00000579061 KIF26BQ2KJY2 2108 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms