RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SLC5A2P31639 672 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 ACTR1BP42025 376 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 SLC1A1P43005 524 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 OR1D5P58170 312 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 ACTR1AP61163 376 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
CRLF3-203ENST00000578692 ZBTB17Q13105 803 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 BIRC2Q13490 618 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 QPCTQ16769 361 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 PYCR3Q53H96 274 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 ODF2Q5BJF6 829 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 LRRC38Q5VT99 294 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 MARK2Q7KZI7 788 aaKnown RBP15.79■□□□□ 0.12
CRLF3-203ENST00000578692 TRIM74Q86UV6 250 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 PIM3Q86V86 326 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 NAGSQ8N159 534 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 LSM14AQ8ND56 463 aaKnown RBP15.79■□□□□ 0.12
CRLF3-203ENST00000578692 CCHCR1Q8TD31 782 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 PATE1Q8WXA2 126 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
CRLF3-203ENST00000578692 COX14Q96I36 57 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 OR2M4Q96R27 311 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 ADGRE3Q9BY15 652 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.79■□□□□ 0.12
CRLF3-203ENST00000578692 INTUQ9ULD6 942 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 PCDHGA7Q9Y5G6 932 aa15.79■□□□□ 0.12
CRLF3-203ENST00000578692 C1orf232A0A0U1RR37 186 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 AKR1B15C9JRZ8 316 aaPredicted RBP15.78■□□□□ 0.12
CRLF3-203ENST00000578692 CPNE6O95741 557 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 HGFP14210 728 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 SPINT3P49223 89 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 PDK1Q15118 436 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 AMZ1Q400G9 498 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 FAM182AQ5T1J6 154 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 NPNTQ6UXI9 565 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 TMPRSS9Q7Z410 1059 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 ZNF438Q7Z4V0 828 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 JAMLQ86YT9 394 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 RFX6Q8HWS3 928 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 CNGA4Q8IV77 575 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 RHOT1Q8IXI2 618 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 TMEM159Q96B96 161 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 WDR24Q96S15 920 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 CMKLR1Q99788 373 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 FAM83DQ9H4H8 585 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 RDH14Q9HBH5 336 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 DDX56Q9NY93 547 aaKnown RBP15.78■□□□□ 0.12
CRLF3-203ENST00000578692 PKD2L2Q9NZM6 624 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 LOXL2Q9Y4K0 774 aa15.78■□□□□ 0.12
CRLF3-203ENST00000578692 BPTFQ12830 3046 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 AGRPO00253 132 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 PPM1DO15297 605 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 KRT1P04264 644 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 TNNT1P13805 278 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 GPR3P46089 330 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 VAC14Q08AM6 782 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 TBX2Q13207 712 aaPredicted RBP15.77■□□□□ 0.12
CRLF3-203ENST00000578692 NR1D2Q14995 579 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 TCEAL1Q15170 157 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 MAP9Q49MG5 647 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 PHF19Q5T6S3 580 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 USP53Q70EK8 1073 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 NT5DC3Q86UY8 548 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 GALNT13Q8IUC8 556 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 SLITRK4Q8IW52 837 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 AGAP3Q96P47 875 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 CEP41Q9BYV8 373 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 SEMA6CQ9H3T2 930 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 PISDQ9UG56 409 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 ZNHIT2Q9UHR6 403 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 CNOT6Q9ULM6 557 aaKnown RBP15.77■□□□□ 0.12
CRLF3-203ENST00000578692 HYOU1Q9Y4L1 999 aa15.77■□□□□ 0.12
CRLF3-203ENST00000578692 PTPRQQ9UMZ3 2332 aa15.77■□□□□ 0.11
CRLF3-203ENST00000578692 RGSL1A5PLK6 1076 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 PPP1R12AO14974 1030 aaPredicted RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 NVLO15381 856 aaKnown RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 DNAJC6O75061 913 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 PRB1P04280 392 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 ATP1A1P05023 1023 aaKnown RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 ITIH1P19827 911 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 COMTP21964 271 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 DYNLT1P63172 113 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 RHDQ02161 417 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 CLN3Q13286 438 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 LRP8Q14114 963 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 GALNT3Q14435 633 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 CLPPQ16740 277 aaPredicted RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 HENMT1Q5T8I9 393 aaKnown RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 MFSD7Q6UXD7 560 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 KDELC2Q7Z4H8 507 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 SNRNP27Q8WVK2 155 aaKnown RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 IMP4Q96G21 291 aaKnown RBP15.76■□□□□ 0.11
CRLF3-203ENST00000578692 OLFM3Q96PB7 478 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 BRD8Q9H0E9 1235 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 ZFYVE1Q9HBF4 777 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 SEPT10Q9P0V9 454 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 VPS18Q9P253 973 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 IGSF10Q6WRI0 2623 aa15.76■□□□□ 0.11
CRLF3-203ENST00000578692 TRBV23OR9-2A0A075B6M9 112 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms