RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 COG4Q9H9E3 785 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 TCF7L2Q9NQB0 619 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 DUS2Q9NX74 493 aaKnown RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 OBP2AQ9NY56 170 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 PKD2L2Q9NZM6 624 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 KLHL42Q9P2K6 505 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 MSRAQ9UJ68 235 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 CRLS1Q9UJA2 301 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 RNF112Q9ULX5 631 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 GLYATL1P3A0A0U1RQE8 302 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 RGSL1A5PLK6 1076 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 A8MT66 165 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 WASH3PC4AMC7 463 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CCL22O00626 93 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 SCAMP3O14828 347 aaKnown RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 AURKAO14965 403 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 MAP3K13O43283 966 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 SMAD6O43541 496 aaKnown RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 SNX2O60749 519 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 KERAO60938 352 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 MOSPD3O75425 235 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 WISP3O95389 354 aaPredicted RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 THRAP10827 490 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 GFAPP14136 432 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CD1DP15813 335 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ZNF37AP17032 561 aaPredicted RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 ZNF30P17039 623 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 SYN1P17600 705 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CTPS1P17812 591 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CCR2P41597 374 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CDKN2DP55273 166 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CDC16Q13042 620 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ZNF460Q14592 562 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 RAB30Q15771 203 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 GDPD4Q6W3E5 623 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 NUDT18Q6ZVK8 323 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 LYSMD3Q7Z3D4 306 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 KIAA0907Q7Z7F0 614 aaPredicted RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 ISCA2Q86U28 154 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ADGRG2Q8IZP9 1017 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CHCHD4Q8N4Q1 142 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 TEX9Q8N6V9 391 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ZNF781Q8N8C0 355 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CEP70Q8NHQ1 597 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CFAP61Q8NHU2 1237 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 MAGEC3Q8TD91 643 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 PTCD3Q96EY7 689 aaKnown RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 PDLIM5Q96HC4 596 aaKnown RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 PANX3Q96QZ0 392 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CCDC106Q9BWC9 280 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 C20orf27Q9GZN8 174 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 NMUR2Q9GZQ4 415 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ALG9Q9H6U8 611 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ASB8Q9H765 288 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 BPIFA1Q9NP55 256 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 NDE1Q9NXR1 346 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 GTSE1Q9NYZ3 720 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 INTS6Q9UL03 887 aaKnown RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 ERVW-1Q9UQF0 538 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 OAS3Q9Y6K5 1087 aaKnown RBP11.07□□□□□ -0.64
SKA2-204ENST00000578519 MIA3Q5JRA6 1907 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 CHD5Q8TDI0 1954 aa11.07□□□□□ -0.64
SKA2-204ENST00000578519 ANAPC1Q9H1A4 1944 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PABPN1LA6NDY0 278 aaKnown RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 B2RBV5 119 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 STX16-NPEPL1H3BU86 382 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 K7ERQ8 282 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 QSOX1O00391 747 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 STX16O14662 325 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 KPNA5O15131 536 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 HOXC11O43248 304 aaPredicted RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 VPS4BO75351 444 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 GPC4O75487 556 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 CIB2O75838 187 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 SUPT7LO94864 414 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 CSPG5O95196 566 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 CBX6O95503 412 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 CHEK2O96017 543 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ENO1P06733 434 aaKnown RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 SBK3P0C264 359 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 T-ENOLP0DO92 83 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 ADH5P11766 374 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 DGKAP23743 735 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 HLA-FP30511 346 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 HNF1BP35680 557 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 DGKGP49619 791 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 NUMBP49757 651 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 CCNHP51946 323 aaPredicted RBP11.06□□□□□ -0.64
SKA2-204ENST00000578519 HERVK_113P63132 956 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 XIAPP98170 497 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PEX6Q13608 980 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PTPRCAPQ14761 206 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 PDGFRLQ15198 375 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 MAPRE2Q15555 327 aa11.06□□□□□ -0.64
SKA2-204ENST00000578519 SPRED3Q2MJR0 410 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms