RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 LRRK1Q38SD2 2015 aa8.53□□□□□ -1.04
NUP88-211ENST00000575976 TRPM6Q9BX84 2022 aa8.53□□□□□ -1.04
NUP88-211ENST00000575976 USP24Q9UPU5 2620 aa8.52□□□□□ -1.04
NUP88-211ENST00000575976 CEP192Q8TEP8 1941 aa8.52□□□□□ -1.04
NUP88-211ENST00000575976 CEP250Q9BV73 2442 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 DOCK9Q9BZ29 2069 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 GLYATL1P3A0A0U1RQE8 302 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 A0A1B0GVT2 93 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 A6NNZ2 444 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FADS2P1A8MWK0 482 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 PRR5-ARHGAP8B1AHC4 643 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 PATE3B3GLJ2 98 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 GAPDHSO14556 408 aaPredicted RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 VILLO15195 856 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A9O60656 530 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 PPFIA2O75334 1257 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 RETP07949 1114 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 THEGLP0DJG4 465 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 TSHRP16473 764 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A6P19224 532 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A1P22309 533 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A4P22310 534 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 PSMA3P25788 255 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 NMBRP28336 390 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 CA5AP35218 305 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A3P35503 534 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A5P35504 534 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 TRIM23P36406 574 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 DPP6P42658 865 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 CSNK1EP49674 416 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 ARSDP51689 593 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 ARL4CP56559 192 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 DCDC1P59894 354 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 ARHGAP8P85298 464 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 XIAPP98170 497 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 ACVR1Q04771 509 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 PEX6Q13608 980 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 LAMB3Q13751 1172 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 CHRNA6Q15825 494 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 DUOXA1Q1HG43 343 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 SKIDA1Q1XH10 827 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 BBS9Q3SYG4 887 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 TPRG1LQ5T0D9 272 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 ZDHHC20Q5W0Z9 365 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 CASC4Q6P4E1 433 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FAM151BQ6UXP7 276 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 KYAT3Q6YP21 454 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 Q6ZSR6 202 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 TRAM1L1Q8N609 369 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FBXO25Q8TCJ0 367 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FUBP1Q96AE4 644 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 KLHDC7BQ96G42 594 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 CDKN2AIPNLQ96HQ2 116 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 TBATAQ96M53 351 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 PLEKHG4BQ96PX9 1271 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 C19orf43Q9BQ61 176 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 APOOQ9BUR5 198 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 KIFC1Q9BW19 673 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 LGR4Q9BXB1 951 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 SPATA16Q9BXB7 569 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FRMD8Q9BZ67 464 aaPredicted RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 CDH19Q9H159 772 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 SMOC1Q9H4F8 434 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 SUDS3Q9H7L9 328 aaPredicted RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A7Q9HAW7 530 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A10Q9HAW8 530 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 UGT1A8Q9HAW9 530 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 MRM3Q9HC36 420 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 RRAGDQ9NQL2 400 aaPredicted RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 FSCN3Q9NQT6 498 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 SUSD2Q9UGT4 822 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 GMEB2Q9UKD1 530 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 RIMKLBQ9ULI2 386 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 SOX13Q9UN79 622 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 OR1A2Q9Y585 309 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 MAD1L1Q9Y6D9 718 aa8.52□□□□□ -1.05
NUP88-211ENST00000575976 FASNP49327 2511 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 TNRC6BQ9UPQ9 1833 aaKnown RBP8.52□□□□□ -1.05
NUP88-211ENST00000575976 SPTBN2O15020 2390 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 PLXNA2O75051 1894 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 MAGEB16A2A368 324 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 OR51F1A6NGY5 319 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 H7C0S8 307 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 TLR4O00206 839 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 INPP4BO15327 924 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 GPR39O43194 453 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 SRP72O76094 671 aaKnown RBP8.51□□□□□ -1.05
NUP88-211ENST00000575976 CFIP05156 583 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 TEAD1P28347 426 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 MC4RP32245 332 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 HOXD12P35452 270 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 HADHAP40939 763 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 RABIFP47224 123 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 CARSP49589 748 aaKnown RBP8.51□□□□□ -1.05
NUP88-211ENST00000575976 AFF3P51826 1226 aaKnown RBP8.51□□□□□ -1.05
NUP88-211ENST00000575976 NXPH1P58417 271 aa8.51□□□□□ -1.05
NUP88-211ENST00000575976 YPEL5P62699 121 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms