RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 JUPP14923 745 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 ACTN2P35609 894 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 TRIM23P36406 574 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 HSD17B3P37058 310 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 MMP13P45452 471 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 BLKP51451 505 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 HK3P52790 923 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 PMS2P54278 862 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 CLDN6P56747 220 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 PPARDQ03181 441 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 TRAF2Q12933 501 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 TARDBPQ13148 414 aaKnown RBP eCLIP10.59□□□□□ -0.71
LITAF-216ENST00000574848 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 ALG11Q2TAA5 492 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 C6orf132Q5T0Z8 1188 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 MARC1Q5VT66 337 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 TIGD7Q6NT04 549 aaPredicted RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 ZDHHC24Q6UX98 284 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 C4orf22Q6V702 233 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 TRMT10CQ7L0Y3 403 aaKnown RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 BZW1Q7L1Q6 419 aaKnown RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 IQCKQ8N0W5 287 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 CBARPQ8N350 705 aaPredicted RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 SDR16C5Q8N3Y7 309 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 FSTL5Q8N475 847 aaPredicted RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 FAM76AQ8TAV0 307 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 FBXO25Q8TCJ0 367 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 NSMCE1Q8WV22 266 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 COQ10AQ96MF6 247 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 ZIM3Q96PE6 472 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 TSGA13Q96PP4 275 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 SH3GL2Q99962 352 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 FERMT1Q9BQL6 677 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 APOOQ9BUR5 198 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 SLC13A1Q9BZW2 595 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 STMN4Q9H169 189 aaPredicted RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 TCEAL2Q9H3H9 227 aaPredicted RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 NOD2Q9HC29 1040 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 KCTD5Q9NXV2 234 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 GOLGA6AQ9NYA3 693 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 B4GALT6Q9UBX8 382 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 ANAPC5Q9UJX4 755 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 CLCA2Q9UQC9 943 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 PLAAQ9Y263 795 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 R3HDM2Q9Y2K5 976 aaKnown RBP10.59□□□□□ -0.71
LITAF-216ENST00000574848 PPIL1Q9Y3C6 166 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 GPSM3Q9Y4H4 160 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 DGKBQ9Y6T7 804 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 ACACAQ13085 2346 aa10.59□□□□□ -0.71
LITAF-216ENST00000574848 GOLGA4Q13439 2230 aaKnown RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 A0A087WV48 116 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 EME2A4GXA9 379 aaPredicted RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 HMGB1P1B2RPK0 211 aaPredicted RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 H3BQF6 201 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 FZD6O60353 706 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 GCATO75600 419 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 RASGRP1O95267 797 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 PGLSO95336 258 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 SYF2O95926 243 aaKnown RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 NUDT17P0C025 328 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 LHCGRP22888 699 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 NFKBIAP25963 317 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 HTR1BP28222 390 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 TEAD1P28347 426 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 STIP1P31948 543 aaKnown RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 VIPR1P32241 457 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 NR2C2P49116 596 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 DYNLT1P63172 113 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 OTUD4Q01804 1114 aaKnown RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 INPP5AQ14642 412 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 LLGL1Q15334 1064 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 TRADDQ15628 312 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 OASLQ15646 514 aaKnown RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 CNGA3Q16281 694 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 PRRT3Q5FWE3 981 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 IZUMO3Q5VZ72 239 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 LVRNQ6Q4G3 990 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 PQLC3Q8N755 202 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 SLC35B2Q8TB61 432 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 ACTL9Q8TC94 416 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 LMX1AQ8TE12 382 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 HDAC11Q96DB2 347 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 WDR92Q96MX6 357 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 IL12RB2Q99665 862 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 HERPUD2Q9BSE4 406 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 POLR1EQ9GZS1 481 aaKnown RBP10.58□□□□□ -0.72
LITAF-216ENST00000574848 CLPBQ9H078 707 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 DNPEPQ9ULA0 475 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 PHTF1Q9UMS5 762 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 PCDHGC4Q9Y5F7 938 aa10.58□□□□□ -0.72
LITAF-216ENST00000574848 ADAMTS20P59510 1910 aa10.57□□□□□ -0.72
LITAF-216ENST00000574848 AGPSO00116 658 aa10.57□□□□□ -0.72
LITAF-216ENST00000574848 DNALI1O14645 258 aaPredicted RBP10.57□□□□□ -0.72
LITAF-216ENST00000574848 TNFRSF10CO14798 259 aa10.57□□□□□ -0.72
LITAF-216ENST00000574848 MATN3O15232 486 aa10.57□□□□□ -0.72
LITAF-216ENST00000574848 MT-CO3P00414 261 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms