RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MGAQ8IWI9 3026 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ZNF106Q9H2Y7 1883 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 TEX51A0A1B0GUA7 166 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 ECEL1O95672 775 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 SOD1P00441 154 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 PNLIPP16233 465 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 ALDH4A1P30038 563 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 CCKBRP32239 447 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 UGT1A5P35504 534 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 MAPK10P53779 464 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 RPL26P61254 145 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 PTSQ03393 145 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 KAZNQ674X7 775 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 OGFOD3Q6PK18 319 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 KDELC2Q7Z4H8 507 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 PIM3Q86V86 326 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 NRROSQ86YC3 692 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 NRSN1Q8IZ57 195 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 EXD1Q8NHP7 514 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 PATE1Q8WXA2 126 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 AGAP3Q96P47 875 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 AGAP2Q99490 1192 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 DPH1Q9BZG8 443 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 CPNE5Q9HCH3 593 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 AKAP7Q9P0M2 348 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 ZNHIT2Q9UHR6 403 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 RPL26L1Q9UNX3 145 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC17A4Q9Y2C5 497 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 LOXL2Q9Y4K0 774 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
NPLOC4-212ENST00000573328 ATMQ13315 3056 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 SMG1Q96Q15 3661 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 ZNF487B1APH4 448 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 ANKRD66B4E2M5 251 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 MTA2O94776 668 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CPNE6O95741 557 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 PRLP01236 227 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 FUCA1P04066 466 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 ATP1A1P05023 1023 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 FGF1P05230 155 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 MMP2P08253 660 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 PIRTP0C851 137 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 ITIH1P19827 911 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 COMTP21964 271 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC1A1P43005 524 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 TNNT3P45378 269 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 OR1D5P58170 312 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 SKOR1P84550 965 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 IHHQ14623 411 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 LLGL1Q15334 1064 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 QPCTQ16769 361 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 TAF1BQ53T94 588 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 ZNF569Q5MCW4 686 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 FAM182AQ5T1J6 154 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 ALS2CLQ60I27 953 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CCDC70Q6NSX1 233 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 MFSD7Q6UXD7 560 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 B4GALNT4Q76KP1 1039 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CHST15Q7LFX5 561 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 LYSMD3Q7Z3D4 306 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 NT5DC3Q86UY8 548 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 VSIG1Q86XK7 387 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CCDC50Q8IVM0 306 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CBARPQ8N350 705 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 PRR11Q96HE9 360 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 CMKLR1Q99788 373 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 FAM83DQ9H4H8 585 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 STN1Q9H668 368 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 RDH14Q9HBH5 336 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 LUC7LQ9NQ29 371 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 INTUQ9ULD6 942 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 SHOC2Q9UQ13 582 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 PLEKHM1Q9Y4G2 1056 aa9.59□□□□□ -0.87
NPLOC4-212ENST00000573328 TRBV23OR9-2A0A075B6M9 112 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 A0A0A6YYK5 440 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 C3orf70A6NLC5 250 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 PSTPIP1O43586 416 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 PRB1P04280 392 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 SLC5A2P31639 672 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 CYLC1P35663 651 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 MAGEA1P43355 309 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 SPINT3P49223 89 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 LRP8Q14114 963 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 TFDP2Q14188 446 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 SPA17Q15506 151 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 PYCR3Q53H96 274 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 HENMT1Q5T8I9 393 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 LRRC38Q5VT99 294 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 CCDC81Q6ZN84 652 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 BZW1Q7L1Q6 419 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 CLEC14AQ86T13 490 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 NAGSQ8N159 534 aa9.58□□□□□ -0.88
NPLOC4-212ENST00000573328 TFB1MQ8WVM0 346 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms