RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PJA2O43164 708 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 ZRANB2O95218 330 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMG6-212ENST00000573153 RPLP0P05388 317 aaKnown RBP17.21■□□□□ 0.35
SMG6-212ENST00000573153 PNLIPP16233 465 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 ADCY8P40145 1251 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 GPR1P46091 355 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 GNPDA1P46926 289 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SPINT3P49223 89 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 ERVPABLB-1P60509 514 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 CTBSQ01459 385 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 TLE3Q04726 772 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 ZFP36L1Q07352 338 aaKnown RBP17.21■□□□□ 0.35
SMG6-212ENST00000573153 AP1B1Q10567 949 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 GALNT3Q14435 633 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 LLGL1Q15334 1064 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 PPP2R5EQ16537 467 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 PYCR3Q53H96 274 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 RAD9BQ6WBX8 426 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 LYSMD3Q7Z3D4 306 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 TMEM139Q8IV31 216 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SLITRK4Q8IW52 837 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SPACA3Q8IXA5 215 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 RCOR2Q8IZ40 523 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 NRSN1Q8IZ57 195 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 WDR48Q8TAF3 677 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SCG3Q8WXD2 468 aaKnown RBP17.21■□□□□ 0.35
SMG6-212ENST00000573153 GRAMD1AQ96CP6 724 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 LIN37Q96GY3 246 aaPredicted RBP17.21■□□□□ 0.35
SMG6-212ENST00000573153 RBM41Q96IZ5 413 aaKnown RBP17.21■□□□□ 0.35
SMG6-212ENST00000573153 SLC46A1Q96NT5 459 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SLC25A51Q9H1U9 297 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 LRRN3Q9H3W5 708 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 IMPACTQ9P2X3 320 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMG6-212ENST00000573153 ADGRG1Q9Y653 693 aa17.21■□□□□ 0.35
SMG6-212ENST00000573153 BPTFQ12830 3046 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 B4GAT1O43505 415 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 NUDT21O43809 227 aaKnown RBP17.2■□□□□ 0.34
SMG6-212ENST00000573153 CST8O60676 142 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
SMG6-212ENST00000573153 EML2O95834 649 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 MT-CYBP00156 380 aaPredicted RBP17.2■□□□□ 0.34
SMG6-212ENST00000573153 PYGLP06737 847 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 CCKBRP32239 447 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 ACTN2P35609 894 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 ABCG1P45844 678 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 EPHB1P54762 984 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 SPIDRQ14159 915 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 TEX44Q53QW1 395 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 KDELC1Q6UW63 502 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 CLEC14AQ86T13 490 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 TEKT5Q96M29 485 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 AGAP3Q96P47 875 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 GORASP1Q9BQQ3 440 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 GLOD4Q9HC38 313 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 NFKBIL1Q9UBC1 381 aaPredicted RBP17.2■□□□□ 0.34
SMG6-212ENST00000573153 EFR3BQ9Y2G0 817 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 SPO11Q9Y5K1 396 aa17.2■□□□□ 0.34
SMG6-212ENST00000573153 ZFC3H1O60293 1989 aaKnown RBP17.19■□□□□ 0.34
SMG6-212ENST00000573153 C1orf232A0A0U1RR37 186 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 RGSL1A5PLK6 1076 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 A6NCN8 305 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 MTSS1O43312 755 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 TNNT1P13805 278 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 CTNNA1P35221 906 aaKnown RBP17.19■□□□□ 0.34
SMG6-212ENST00000573153 PTPN7P35236 360 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 COPS2P61201 443 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 DOK6Q6PKX4 331 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 DAAM2Q86T65 1068 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 CCNJLQ8IV13 435 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 GPR26Q8NDV2 337 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 OR6C4Q8NGE1 309 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 OXNAD1Q96HP4 312 aaPredicted RBP17.19■□□□□ 0.34
SMG6-212ENST00000573153 OR2M4Q96R27 311 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 MLPHQ9BV36 600 aaPredicted RBP17.19■□□□□ 0.34
SMG6-212ENST00000573153 ADGRE3Q9BY15 652 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 GSDMCQ9BYG8 508 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 FOXP3Q9BZS1 431 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 LACRTQ9GZZ8 138 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 DPEP2Q9H4A9 486 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 SUDS3Q9H7L9 328 aaPredicted RBP17.19■□□□□ 0.34
SMG6-212ENST00000573153 LRIT1Q9P2V4 623 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 MOSPD1Q9UJG1 213 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 TMPRSS11EQ9UL52 423 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 ATXN7L1Q9ULK2 861 aaPredicted RBP17.19■□□□□ 0.34
SMG6-212ENST00000573153 PCDHA3Q9Y5H8 950 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
SMG6-212ENST00000573153 CCDC187A0A096LP49 1063 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 GOLGA6CA6NDK9 693 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 GOLGA6BA6NDN3 693 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 PRR19A6NJB7 356 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 AURKAO14965 403 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 INPP4BO15327 924 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 ECEL1O95672 775 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 PIRTP0C851 137 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 GOLGA6DP0CG33 693 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 VAV2P52735 878 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 DCDC1P59894 354 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms