RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 TOP1MTQ969P6 601 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 FEM1AQ9BSK4 669 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 SLC25A23Q9BV35 468 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 ADAMTS6Q9UKP5 1117 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
POLR2A-201ENST00000572844 H0Y626 953 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 AZIN1O14977 448 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 STX7O15400 261 aaKnown RBP16.22■□□□□ 0.19
POLR2A-201ENST00000572844 BCAS2O75934 225 aaPredicted RBP16.22■□□□□ 0.19
POLR2A-201ENST00000572844 PRSS56P0CW18 603 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 RAG1P15918 1043 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 MC4RP32245 332 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 ERFP50548 548 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 SMAD3P84022 425 aaKnown RBP16.22■□□□□ 0.19
POLR2A-201ENST00000572844 LRP8Q14114 963 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 PFKFB4Q16877 469 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 C1orf53Q5VUE5 145 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 TXNDC11Q6PKC3 985 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 GK5Q6ZS86 529 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 DCAF4L2Q8NA75 395 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 CYP2S1Q96SQ9 504 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 ZBED2Q9BTP6 218 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 KLHL4Q9C0H6 718 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 FKBPLQ9UIM3 349 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 INSL5Q9Y5Q6 135 aa16.22■□□□□ 0.19
POLR2A-201ENST00000572844 TRIM38O00635 465 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 PRRG1O14668 218 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 SNAP91O60641 907 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 URODP06132 367 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 SNRPB2P08579 225 aaKnown RBP16.21■□□□□ 0.19
POLR2A-201ENST00000572844 GFAPP14136 432 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 LAG3P18627 525 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 DPP6P42658 865 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 AP1S1P61966 158 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 TLE2Q04725 743 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 PPP1R3AQ16821 1122 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 PTPRNQ16849 979 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
POLR2A-201ENST00000572844 ITIH5Q86UX2 942 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 PDSS2Q86YH6 399 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 STK40Q8N2I9 435 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 FBXO39Q8N4B4 442 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 CARNMT1Q8N4J0 409 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 ADAMTS19Q8TE59 1207 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 GATA6Q92908 595 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 PPP2R3CQ969Q6 453 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 ALG14Q96F25 216 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 GPR21Q99679 349 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 NPAS2Q99743 824 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 RC3H2Q9HBD1 1191 aaKnown RBP16.21■□□□□ 0.19
POLR2A-201ENST00000572844 MAGEE1Q9HCI5 957 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 RNF112Q9ULX5 631 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 DNAJC15Q9Y5T4 150 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 BPTFQ12830 3046 aa16.21■□□□□ 0.19
POLR2A-201ENST00000572844 SCN8AQ9UQD0 1980 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 VPS4BO75351 444 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 RPS17P08708 135 aaKnown RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 XRCC1P18887 633 aaPredicted RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 MZF1P28698 734 aaPredicted RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 PTGER3P43115 390 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 ATN1P54259 1190 aaPredicted RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 PSME3P61289 254 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 RHOAP61586 193 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 LCP2Q13094 533 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 FLOT2Q14254 428 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 AGKQ53H12 422 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 ANKS6Q68DC2 871 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CLEC6AQ6EIG7 209 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 PIANPQ8IYJ0 282 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 KCNJ9Q92806 393 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 VWCEQ96DN2 955 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 TMA16Q96EY4 203 aaKnown RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 VCXQ9H320 206 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 MID1IP1Q9NPA3 183 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CACNA2D2Q9NY47 1150 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 SPG21Q9NZD8 308 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 SUCOQ9UBS9 1254 aaKnown RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 TBX21Q9UL17 535 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 PCDHGA7Q9Y5G6 932 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 ABHD14A-ACY1A0A1B0GW23 586 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 MAGEA13PA6NCF6 341 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 SUPT3HB4E1H0 165 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 ACOT8O14734 319 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CFLARO15519 480 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CLASP2O75122 1294 aaKnown RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 SUPT3HO75486 399 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 ESR1P03372 595 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 VEGFBP49765 207 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CDH13P55290 713 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CLCQ05315 142 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 REP15Q6BDI9 236 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 PSAPL1Q6NUJ1 521 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 CMTR2Q8IYT2 770 aaKnown RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 GDPD5Q8WTR4 605 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 EXT2Q93063 718 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 IL21Q9HBE4 155 aa16.2■□□□□ 0.18
POLR2A-201ENST00000572844 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.2■□□□□ 0.18
POLR2A-201ENST00000572844 IL17CQ9P0M4 197 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms