RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RBM22Q9NW64 420 aaKnown RBP eCLIP7.45□□□□□ -1.224e-7■■■■■ 29.9
NUP88-205ENST00000572809 KCTD5Q9NXV2 234 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 APOBEC3BQ9UH17 382 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 INTUQ9ULD6 942 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 PNMA8BQ9ULN7 279 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 OR1A2Q9Y585 309 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 PTPRBP23467 1997 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MAP1BP46821 2468 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 EPG5Q9HCE0 2579 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 ARID1BQ8NFD5 2236 aaPredicted RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 CPED1A4D0V7 1026 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 LRRD1A4D1F6 860 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 LMO7DNF2Z398 122 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 J3QW42 95 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 YY2O15391 372 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 MFSD11O43934 449 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 GCATO75600 419 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PGLSO95336 258 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 CPP00450 1065 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TNFP01375 233 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PCCBP05166 539 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 ANXA6P08133 673 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 HOXC4P09017 264 aaPredicted RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 CYP2A6P11509 494 aaPredicted RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 MYF5P13349 255 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 KRT10P13645 584 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 CTSEP14091 401 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 CCNB1P14635 433 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TSHRP16473 764 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 VIPR1P32241 457 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TRIM23P36406 574 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 SLC1A1P43005 524 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 MAGEA1P43355 309 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 HK3P52790 923 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 SRP54P61011 504 aaKnown RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 CYP4F3Q08477 520 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 GALNT2Q10471 571 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TRAF2Q12933 501 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 NFATC4Q14934 902 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 DEFB133Q30KQ1 61 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 ODF2Q5BJF6 829 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 HES3Q5TGS1 186 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 DENND2CQ68D51 928 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PNCKQ6P2M8 343 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PROSER1Q86XN7 944 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 HID1Q8IV36 788 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 CBARPQ8N350 705 aaPredicted RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 SDR16C5Q8N3Y7 309 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 FSTL5Q8N475 847 aaPredicted RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.44□□□□□ -1.22
NUP88-205ENST00000572809 PQLC3Q8N755 202 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TC2NQ8N9U0 490 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PLA2G15Q8NCC3 412 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PIH1D2Q8WWB5 315 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 RFFLQ8WZ73 363 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 MAML1Q92585 1016 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 FATE1Q969F0 183 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 TBATAQ96M53 351 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 SEMA3CQ99985 751 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 ANP32EQ9BTT0 268 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 POLR1EQ9GZS1 481 aaKnown RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 CLPBQ9H078 707 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 ABCG4Q9H172 646 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 SRA1Q9HD15 236 aaKnown RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 HAUS2Q9NVX0 235 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 DNAJB12Q9NXW2 375 aaKnown RBP7.44□□□□□ -1.22
NUP88-205ENST00000572809 NCKIPSDQ9NZQ3 722 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 DKK4Q9UBT3 224 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 B4GALT6Q9UBX8 382 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 AMACRQ9UHK6 382 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 CLCA2Q9UQC9 943 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 PPIL1Q9Y3C6 166 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 RAI2Q9Y5P3 530 aa7.44□□□□□ -1.22
NUP88-205ENST00000572809 AKAP13Q12802 2813 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 KMT2BQ9UMN6 2715 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 LY6G6EA0A0G2JKS1 128 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 EME2A4GXA9 379 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 C3orf70A6NLC5 250 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 ZNF487B1APH4 448 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 CACNB4O00305 520 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 PDE2AO00408 941 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 APOL1O14791 398 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 OPA1O60313 960 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 SMNDC1O75940 238 aaKnown RBP eCLIP7.43□□□□□ -1.22
NUP88-205ENST00000572809 HEXIM1O94992 359 aaKnown RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 RASGRP1O95267 797 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 MT-CO3P00414 261 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 JCHAINP01591 159 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 GP1BAP07359 652 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 PDHA1P08559 390 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ALPIP09923 528 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 TNNT1P13805 278 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 ZFXP17010 805 aaPredicted RBP7.43□□□□□ -1.22
NUP88-205ENST00000572809 CTPS1P17812 591 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 GM2AP17900 193 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 KELP23276 732 aa7.43□□□□□ -1.22
NUP88-205ENST00000572809 NOP2P46087 812 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms