RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TIGD7Q6NT04 549 aaPredicted RBP18.01■□□□□ 0.47
CHD3-214ENST00000572579 NPNTQ6UXI9 565 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 MARK2Q7KZI7 788 aaKnown RBP18.01■□□□□ 0.47
CHD3-214ENST00000572579 ZNF765Q7L2R6 523 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 CCDC13Q8IYE1 715 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 LPCAT1Q8NF37 534 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 CTNNBL1Q8WYA6 563 aaPredicted RBP18.01■□□□□ 0.47
CHD3-214ENST00000572579 STRADBQ9C0K7 418 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 PCDH9Q9HC56 1237 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 ACSL6Q9UKU0 697 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 PRKAB1Q9Y478 270 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 TTLL3Q9Y4R7 772 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 ZNF462Q96JM2 2506 aa18.01■□□□□ 0.47
CHD3-214ENST00000572579 TRBV23OR9-2A0A075B6M9 112 aa18■□□□□ 0.47
CHD3-214ENST00000572579 PRAMEF33A0A0G2JMD5 474 aa18■□□□□ 0.47
CHD3-214ENST00000572579 FADS2P1A8MWK0 482 aa18■□□□□ 0.47
CHD3-214ENST00000572579 C9orf172C9J069 976 aa18■□□□□ 0.47
CHD3-214ENST00000572579 ERVH48-1M5A8F1 160 aa18■□□□□ 0.47
CHD3-214ENST00000572579 INPP4BO15327 924 aa18■□□□□ 0.47
CHD3-214ENST00000572579 NVLO15381 856 aaKnown RBP18■□□□□ 0.47
CHD3-214ENST00000572579 PRAMEF10O60809 474 aa18■□□□□ 0.47
CHD3-214ENST00000572579 DNAJC6O75061 913 aa18■□□□□ 0.47
CHD3-214ENST00000572579 ATP1A1P05023 1023 aaKnown RBP18■□□□□ 0.47
CHD3-214ENST00000572579 CCL4P13236 92 aa18■□□□□ 0.47
CHD3-214ENST00000572579 ZNF30P17039 623 aa18■□□□□ 0.47
CHD3-214ENST00000572579 CES1P23141 567 aa18■□□□□ 0.47
CHD3-214ENST00000572579 CD86P42081 329 aa18■□□□□ 0.47
CHD3-214ENST00000572579 SLC9A4Q6AI14 798 aa18■□□□□ 0.47
CHD3-214ENST00000572579 VSTM4Q8IW00 320 aa18■□□□□ 0.47
CHD3-214ENST00000572579 MAP7D3Q8IWC1 876 aa18■□□□□ 0.47
CHD3-214ENST00000572579 CCNYQ8ND76 341 aa18■□□□□ 0.47
CHD3-214ENST00000572579 KIAA1524Q8TCG1 905 aa18■□□□□ 0.47
CHD3-214ENST00000572579 USP7Q93009 1102 aa18■□□□□ 0.47
CHD3-214ENST00000572579 PMEPA1Q969W9 287 aa18■□□□□ 0.47
CHD3-214ENST00000572579 TRIB3Q96RU7 358 aa18■□□□□ 0.47
CHD3-214ENST00000572579 CEP41Q9BYV8 373 aa18■□□□□ 0.47
CHD3-214ENST00000572579 TMEM9Q9P0T7 183 aa18■□□□□ 0.47
CHD3-214ENST00000572579 AMACRQ9UHK6 382 aa18■□□□□ 0.47
CHD3-214ENST00000572579 HYOU1Q9Y4L1 999 aa18■□□□□ 0.47
CHD3-214ENST00000572579 BSNQ9UPA5 3926 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 IGHV5-10-1A0A0J9YXX1 117 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 MTA2O94776 668 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 KRT10P13645 584 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 WT1P19544 449 aaPredicted RBP17.99■□□□□ 0.47
CHD3-214ENST00000572579 MX2P20592 715 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 NFKBIAP25963 317 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 CSF2RBP32927 897 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 ACTR1BP42025 376 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 SPINT3P49223 89 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 EPHB1P54762 984 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 ACTR1AP61163 376 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 IFI35P80217 286 aaPredicted RBP17.99■□□□□ 0.47
CHD3-214ENST00000572579 C19orf57Q0VDD7 668 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 HENMT1Q5T8I9 393 aaKnown RBP17.99■□□□□ 0.47
CHD3-214ENST00000572579 ZFAND4Q86XD8 727 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 JAMLQ86YT9 394 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 NRSN1Q8IZ57 195 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 RCBTB1Q8NDN9 531 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 TADA1Q96BN2 335 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 OLFM3Q96PB7 478 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 OR2M4Q96R27 311 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 NHEJ1Q9H9Q4 299 aaPredicted RBP17.99■□□□□ 0.47
CHD3-214ENST00000572579 ABHD10Q9NUJ1 306 aa17.99■□□□□ 0.47
CHD3-214ENST00000572579 LRRD1A4D1F6 860 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 RHPN2P1A8MT19 583 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 ANKRD66B4E2M5 251 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 CPNE6O95741 557 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 MPSTP25325 297 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 RPL26P61254 145 aaKnown RBP17.98■□□□□ 0.47
CHD3-214ENST00000572579 RHDQ02161 417 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 SQSTM1Q13501 440 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 LY6DQ14210 128 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 ZNF648Q5T619 568 aaPredicted RBP17.98■□□□□ 0.47
CHD3-214ENST00000572579 PHF19Q5T6S3 580 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 PIM3Q86V86 326 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 ZNF761Q86XN6 746 aaPredicted RBP17.98■□□□□ 0.47
CHD3-214ENST00000572579 NDUFAF2Q8N183 169 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 EXD1Q8NHP7 514 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 CCDC97Q96F63 343 aaPredicted RBP17.98■□□□□ 0.47
CHD3-214ENST00000572579 CCNL2Q96S94 520 aaPredicted RBP17.98■□□□□ 0.47
CHD3-214ENST00000572579 RPL26L1Q9UNX3 145 aaKnown RBP17.98■□□□□ 0.47
CHD3-214ENST00000572579 HEY1Q9Y5J3 304 aa17.98■□□□□ 0.47
CHD3-214ENST00000572579 PIEZO2Q9H5I5 2752 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 IGHV1OR21-1A0A087WYE8 117 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 C1orf232A0A0U1RR37 186 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 AKR1B10O60218 316 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 MFAP3LO75121 409 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 JMJD7P0C870 316 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 FGF3P11487 239 aaPredicted RBP17.97■□□□□ 0.47
CHD3-214ENST00000572579 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
CHD3-214ENST00000572579 ADCY2Q08462 1091 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 GALNT3Q14435 633 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 CCDC81Q6ZN84 652 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 LYSMD3Q7Z3D4 306 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 KDELC2Q7Z4H8 507 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 DTX1Q86Y01 620 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 RNF25Q96BH1 459 aaPredicted RBP17.97■□□□□ 0.47
CHD3-214ENST00000572579 IMP4Q96G21 291 aaKnown RBP17.97■□□□□ 0.47
CHD3-214ENST00000572579 WBP1Q96G27 269 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 ARFGAP3Q9NP61 516 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms