RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 FHOD1Q9Y613 1164 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 LRP4O75096 1905 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 NCOA6Q14686 2063 aaPredicted RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 A0A1B0GVL5 298 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 A0A1W2PQJ5 194 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 TLCD2A6NGC4 264 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 CACNB4O00305 520 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 AREL1O15033 823 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 EXOC3O60645 756 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ZNF202O95125 648 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 TIAF1O95411 115 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 HLA-DRAP01903 254 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 LTFP02788 710 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 PCCBP05166 539 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 CCNB1P14635 433 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 PFKFB1P16118 471 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 LPOP22079 712 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 PIK3CAP42336 1068 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 CA7P43166 264 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 IRAK1P51617 712 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 CCNHP51946 323 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 NDUFA8P51970 172 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 NDST2P52849 883 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 GYS2P54840 703 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 DLG4P78352 724 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 CAMK4Q16566 473 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 HIF1AQ16665 826 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ZACNQ401N2 412 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ZNF805Q5CZA5 627 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 TTC39BQ5VTQ0 682 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 FAAH2Q6GMR7 532 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 SHC4Q6S5L8 630 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 SASS6Q6UVJ0 657 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 TTC7BQ86TV6 843 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 TAC4Q86UU9 113 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 SCML4Q8N228 414 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 RYBPQ8N488 228 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 ZADH2Q8N4Q0 377 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ARFGAP1Q8N6T3 406 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 SLC4A11Q8NBS3 891 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 OR6K2Q8NGY2 324 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 OR10G6Q8NH81 332 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ADAMTS18Q8TE60 1221 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 CLEC4CQ8WTT0 213 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 NCSTNQ92542 709 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ARHGEF26Q96DR7 871 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 RPRD1AQ96P16 312 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 ALPK1Q96QP1 1244 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 GPR87Q9BY21 358 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 ZNF552Q9H707 407 aaPredicted RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 ARHGEF38Q9NXL2 777 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 SIDT1Q9NXL6 827 aaKnown RBP6.88□□□□□ -1.31
CHD3-213ENST00000571249 TSPAN16Q9UKR8 245 aa6.88□□□□□ -1.31
CHD3-213ENST00000571249 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 A6NHS1 94 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 KCNU1A8MYU2 1149 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 PCDH17O14917 1159 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 SPAG6O75602 509 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 MT-ND3P03897 115 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 FYNP06241 537 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 RHOCP08134 193 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 PLEKP08567 350 aaPredicted RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 AK4P27144 223 aaPredicted RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 HOXC12P31275 282 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 LONP1P36776 959 aaKnown RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 RGS7P49802 495 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 TDGF1P3P51864 188 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 RAD23BP54727 409 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 KIAA1024LP59773 190 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 RPS15P62841 145 aaKnown RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 OTUD4Q01804 1114 aaKnown RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 BST2Q10589 180 aaKnown RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 RAPGEF1Q13905 1077 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 IQCB1Q15051 598 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 TLR1Q15399 786 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 STX1AQ16623 288 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 WDR74Q6RFH5 385 aaPredicted RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 NXPE4Q6UWF7 544 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 KRTAP1-3Q8IUG1 177 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 NELFCDQ8IXH7 590 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 ZBTB2Q8N680 514 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 ATP6V0D2Q8N8Y2 350 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 PLA2G15Q8NCC3 412 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 IRGQQ8WZA9 623 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 OR6C1Q96RD1 312 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 SLC38A3Q99624 504 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 BPIFA3Q9BQP9 254 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 GSDMCQ9BYG8 508 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 BRD8Q9H0E9 1235 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 OLAHQ9NV23 265 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 ANO10Q9NW15 660 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 HECAQ9UBI9 543 aaPredicted RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 HESX1Q9UBX0 185 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 SLC12A6Q9UHW9 1150 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 FARSAQ9Y285 508 aaKnown RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 TBC1D30Q9Y2I9 924 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
CHD3-213ENST00000571249 ST14Q9Y5Y6 855 aa6.87□□□□□ -1.31
CHD3-213ENST00000571249 WNK1Q9H4A3 2382 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms