RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ZBTB17Q13105 803 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 EIF3IQ13347 325 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 BIRC2Q13490 618 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 PEX6Q13608 980 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 HLTFQ14527 1009 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 IHHQ14623 411 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC9A4Q6AI14 798 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC30A9Q6PML9 568 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 RFLNAQ6ZTI6 216 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SPRED1Q7Z699 444 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 B3GNT8Q7Z7M8 397 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 NRSN1Q8IZ57 195 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 GPBAR1Q8TDU6 330 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 ZDHHC1Q8WTX9 485 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SCAMP4Q969E2 229 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 TMEM74Q96NL1 305 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC46A1Q96NT5 459 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 OR2M4Q96R27 311 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 ADGRE3Q9BY15 652 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 ABCG8Q9H221 673 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 DDX56Q9NY93 547 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRIT1Q9P2V4 623 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 RNF215Q9Y6U7 377 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SMG1Q96Q15 3661 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 C1orf232A0A0U1RR37 186 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 A0A1W2PQM1 296 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 PMS2P1A4D2B8 440 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 C3orf70A6NLC5 250 aaPredicted RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 PLD2O14939 933 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 TNFSF15O95150 251 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 SOD1P00441 154 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 PRLP01236 227 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 ITGA2BP08514 1039 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 PNLIPP16233 465 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCKBRP32239 447 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 ADCY8P40145 1251 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 POLD2P49005 469 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 UCNP55089 124 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 DYNLT1P63172 113 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 SOWAHCQ53LP3 525 aaPredicted RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 RAVER1Q8IY67 606 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 EXD1Q8NHP7 514 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCHCR1Q8TD31 782 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCDC97Q96F63 343 aaPredicted RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 UBL7Q96S82 380 aaPredicted RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 LYSMD1Q96S90 227 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 MLPHQ9BV36 600 aaPredicted RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 RIOK2Q9BVS4 552 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 TRIM5Q9C035 493 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 PRORYQ9H606 182 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 SPATS2LQ9NUQ6 558 aaKnown RBP12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 PKD2L2Q9NZM6 624 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 HYOU1Q9Y4L1 999 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 ASXL3Q9C0F0 2248 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRRK1Q38SD2 2015 aa12.3□□□□□ -0.44
CTDNEP1-205ENST00000570828 ANKRD36A6QL64 1941 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 MYLKQ15746 1914 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 RHPN2P1A8MT19 583 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 INPP4BO15327 924 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 KLK10O43240 276 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 ZW10O43264 779 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 CLDN7O95471 211 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 FUCA1P04066 466 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 MMP2P08253 660 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 COMTP21964 271 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 AK4P27144 223 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 ACTR1BP42025 376 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 MAZP56270 477 aaKnown RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 TMPRSS3P57727 454 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 ACTR1AP61163 376 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 CXADRP78310 365 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 SKOR1P84550 965 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 CTBSQ01459 385 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 GALNT3Q14435 633 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 TCEAL1Q15170 157 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 QPCTQ16769 361 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 SARM1Q6SZW1 724 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 NPNTQ6UXI9 565 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 MARK2Q7KZI7 788 aaKnown RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 RAB11FIP2Q7L804 512 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 GPR155Q7Z3F1 870 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 NLRP8Q86W28 1048 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 NRROSQ86YC3 692 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 FBXO39Q8N4B4 442 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 PRR11Q96HE9 360 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-205ENST00000570828 AGAP3Q96P47 875 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms