RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 KDM3AQ9Y4C1 1321 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 hCG_1809904A0A1W2PP81 198 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 A0A1W2PPE2 198 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 A0A1W2PR64 198 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 ARHGEF37A1IGU5 675 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 URADA6NGE7 173 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 CAPN9O14815 690 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 WDR46O15213 610 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 NKX2-8O15522 239 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 TXNL1O43396 289 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 CSPG5O95196 566 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 CCDC175P0C221 793 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 KRT13P13646 458 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 MCM3P25205 808 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 CHRNA5P30532 468 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 KRT2P35908 639 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 HSD17B4P51659 736 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 MRPL12P52815 198 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 RCAN1P53805 252 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 RNASELQ05823 741 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 GOLGA8DPQ0D2H9 430 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 TBL3Q12788 808 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 CSHL1Q14406 222 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 NAA25Q14CX7 972 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 C9orf152Q5JTZ5 239 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 ZNF569Q5MCW4 686 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 TTI2Q6NXR4 508 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 WDR73Q6P4I2 378 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 CHST3Q7LGC8 479 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 ADGRG6Q86SQ4 1221 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 FAM185AQ8N0U4 392 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 POC5Q8NA72 575 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 SETD6Q8TBK2 473 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 SPATA18Q8TC71 538 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 MRPS27Q92552 414 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 SLC22A18Q96BI1 424 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 PERPQ96FX8 193 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 CCDC114Q96M63 670 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 AK8Q96MA6 479 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 FUT8Q9BYC5 575 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 SNTG1Q9NSN8 517 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 TMLHEQ9NVH6 421 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 ALKBH4Q9NXW9 302 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 DNAJB9Q9UBS3 223 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 UBA2Q9UBT2 640 aaPredicted RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 HOOK1Q9UJC3 728 aaKnown RBP4.82□□□□□ -1.64
CHD9-220ENST00000569794 FBXL5Q9UKA1 691 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 DUSP12Q9UNI6 340 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 TRPV2Q9Y5S1 764 aa4.82□□□□□ -1.64
CHD9-220ENST00000569794 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 FAM237BA0A1B0GVD1 139 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 STMND1H3BQB6 276 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CTDSP2O14595 271 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 SYN3O14994 580 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 TGFB1I1O43294 461 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 TNFSF14O43557 240 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 TAF5LO75529 589 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CER1O95813 267 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 ALDOAP04075 364 aaKnown RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 CYP21A2P08686 494 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 FDPSP14324 419 aaKnown RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 CPT2P23786 658 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 PBX3P40426 434 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 GPD2P43304 727 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 NRIP1P48552 1158 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CDH8P55286 799 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 HDAC4P56524 1084 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 RPL7AP62424 266 aaKnown RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 TUBA1BP68363 451 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 KLHL30Q0D2K2 578 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 ILF3Q12906 894 aaKnown RBP eCLIP4.81□□□□□ -1.64
CHD9-220ENST00000569794 CBX3Q13185 183 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 IRF3Q14653 427 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 ANKDD1AQ495B1 522 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 RAB41Q5JT25 222 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CBWD5Q5RIA9 395 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 AAGABQ6PD74 315 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 TMEM88Q6PEY1 159 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 NCEH1Q6PIU2 408 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 TRAT1Q6PIZ9 186 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CHST9Q7L1S5 443 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 PLPPR4Q7Z2D5 763 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 IGFN1Q86VF2 1251 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CCDC25Q86WR0 208 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 ZNF540Q8NDQ6 660 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CTCFLQ8NI51 663 aaPredicted RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 KIF18AQ8NI77 898 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 POMGNT1Q8WZA1 660 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 TAF15Q92804 592 aaKnown RBP eCLIP4.81□□□□□ -1.64
CHD9-220ENST00000569794 FAM162AQ96A26 154 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 RBM18Q96H35 190 aaKnown RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 PPP1R13BQ96KQ4 1090 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 NR1H4Q96RI1 486 aaPredicted RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 MECRQ9BV79 373 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 KLHL31Q9H511 634 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 CCDC134Q9H6E4 229 aa4.81□□□□□ -1.64
CHD9-220ENST00000569794 DDX43Q9NXZ2 648 aaKnown RBP4.81□□□□□ -1.64
CHD9-220ENST00000569794 DONSONQ9NYP3 566 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms