RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 NUDT2P50583 147 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 SCNN1BP51168 640 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CLCN2P51788 898 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 EPHB1P54762 984 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CDKN2DP55273 166 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 RHOAP61586 193 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 RPS24P62847 133 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 SMAD3P84022 425 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 KLC1Q07866 573 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 FOXD4Q12950 439 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 GRIK2Q13002 908 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 LCP2Q13094 533 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ART3Q13508 389 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CDH18Q13634 790 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 GALNT3Q14435 633 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ZNF460Q14592 562 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 PDCD2Q16342 344 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 ACCSLQ4AC99 568 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 COQ5Q5HYK3 327 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ZNF678Q5SXM1 525 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 SPOUT1Q5T280 376 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 GPR158Q5T848 1215 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ARMC12Q5T9G4 340 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 VWA5B1Q5TIE3 1220 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 RNF219Q5W0B1 726 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CXorf57Q6NSI4 855 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 IRGCQ6NXR0 463 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 METTL2BQ6P1Q9 378 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 PRMT9Q6P2P2 845 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 HACD2Q6Y1H2 254 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 SLC39A5Q6ZMH5 540 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 DHDDSQ86SQ9 333 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ADAMTSL2Q86TH1 951 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ISCA2Q86U28 154 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 TMEM173Q86WV6 379 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 SNX32Q86XE0 403 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CLYBLQ8N0X4 340 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 LSMEM2Q8N112 164 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 PELI3Q8N2H9 469 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ELMOD1Q8N336 334 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 PHTF2Q8N3S3 785 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 FBXW8Q8N3Y1 598 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CPXM2Q8N436 756 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 MAPK15Q8TD08 544 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 TSPEARQ8WU66 669 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 MRPS31Q92665 395 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 ZNF689Q96CS4 500 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 ZNF333Q96JL9 665 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 CNTNAP3BQ96NU0 1288 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 LENG8Q96PV6 779 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 PANX3Q96QZ0 392 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 OR52B2Q96RD2 323 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 MYCBPQ99417 103 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 SLC25A23Q9BV35 468 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 C1QTNF3Q9BXJ4 246 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 MRPL1Q9BYD6 325 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 CNTNAP3Q9BZ76 1288 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 VCXQ9H320 206 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 GSTO2Q9H4Y5 243 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ALG9Q9H6U8 611 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 RC3H2Q9HBD1 1191 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 MAGEE1Q9HCI5 957 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 MRPL17Q9NRX2 175 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 SPATS2LQ9NUQ6 558 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 NMRK1Q9NWW6 199 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 C6orf203Q9P0P8 240 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 MARCH4Q9P2E8 410 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 NKX1-2Q9UD57 310 aaPredicted RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 ZDHHC2Q9UIJ5 367 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ZMYM5Q9UJ78 669 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 TRMT6Q9UJA5 497 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 TRAF6Q9Y4K3 522 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 TNPO3Q9Y5L0 923 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 RAI2Q9Y5P3 530 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 INSL5Q9Y5Q6 135 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 ARL5AQ9Y689 179 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 OAS3Q9Y6K5 1087 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.71□□□□□ -1.5
CDH13-213ENST00000569454 LTBP2Q14767 1821 aa5.71□□□□□ -1.5
CDH13-213ENST00000569454 MYLKQ15746 1914 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 KIAA1671Q9BY89 1806 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 UBA6A0AVT1 1052 aaPredicted RBP5.7□□□□□ -1.5
CDH13-213ENST00000569454 DYTNA2CJ06 578 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 GRXCR2A6NFK2 248 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 PSMD12O00232 456 aaPredicted RBP5.7□□□□□ -1.5
CDH13-213ENST00000569454 EIF3FO00303 357 aaPredicted RBP5.7□□□□□ -1.5
CDH13-213ENST00000569454 GFRA2O00451 464 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 NEMP1O14524 444 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 CASQ2O14958 399 aaPredicted RBP5.7□□□□□ -1.5
CDH13-213ENST00000569454 AURKAO14965 403 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 ADAM12O43184 909 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 PEX1O43933 1283 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 FZD6O60353 706 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 ZMPSTE24O75844 475 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 SUPT7LO94864 414 aa5.7□□□□□ -1.5
CDH13-213ENST00000569454 GJB5O95377 273 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms