RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 MT-CYBP00156 380 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-211ENST00000568586 APOC2P02655 101 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 ADCY8P40145 1251 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 GNPDA1P46926 289 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 ILF3Q12906 894 aaKnown RBP eCLIP29.22■■■□□ 2.27
RAB40C-211ENST00000568586 C14orf28Q4W4Y0 310 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 IGF2-ASQ6U949 168 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 TMC3Q7Z5M5 1100 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 CCDC50Q8IVM0 306 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 ACRBPQ8NEB7 543 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 SNIP1Q8TAD8 396 aaKnown RBP29.22■■■□□ 2.27
RAB40C-211ENST00000568586 KIAA1524Q8TCG1 905 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 SRPK1Q96SB4 655 aaKnown RBP29.22■■■□□ 2.27
RAB40C-211ENST00000568586 CDH19Q9H159 772 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 ZFYVE1Q9HBF4 777 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 SPATS2LQ9NUQ6 558 aaKnown RBP29.22■■■□□ 2.27
RAB40C-211ENST00000568586 ENTPD2Q9Y5L3 495 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 CCDC66A2RUB6 948 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 CASC3O15234 703 aaKnown RBP29.21■■■□□ 2.27
RAB40C-211ENST00000568586 EPOP01588 193 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 PDX1P52945 283 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 LYSMD3Q7Z3D4 306 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 LSMEM2Q8N112 164 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 DPEP2Q9H4A9 486 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 POLR1BQ9H9Y6 1135 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 VPS18Q9P253 973 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 TMEM98Q9Y2Y6 226 aa29.21■■■□□ 2.27
RAB40C-211ENST00000568586 LOC285095A0A1B0GVY8 99 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 TLX3O43711 291 aaPredicted RBP29.2■■■□□ 2.26
RAB40C-211ENST00000568586 NUDT21O43809 227 aaKnown RBP29.2■■■□□ 2.26
RAB40C-211ENST00000568586 FGF1P05230 155 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 DCDC1P59894 354 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 CTBSQ01459 385 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 PYCR3Q53H96 274 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 KDELC1Q6UW63 502 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 ZC3H18Q86VM9 953 aaKnown RBP29.2■■■□□ 2.26
RAB40C-211ENST00000568586 SFTPA2Q8IWL1 248 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 HTR3CQ8WXA8 447 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 FCRL5Q96RD9 977 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 HERPUD2Q9BSE4 406 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 HEMGNQ9BXL5 484 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 TAAR2Q9P1P5 351 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 FAM153AQ9UHL3 310 aa29.2■■■□□ 2.26
RAB40C-211ENST00000568586 GRID2IPA4D2P6 1211 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 FADS2P1A8MWK0 482 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 PEX6Q13608 980 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 SPIDRQ14159 915 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 NOMO1Q15155 1222 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 TBC1D25Q3MII6 688 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 KDELC2Q7Z4H8 507 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 ZNF567Q8N184 647 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 FGF11Q92914 225 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 RAD18Q9NS91 495 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 TRHDEQ9UKU6 1024 aa29.19■■■□□ 2.26
RAB40C-211ENST00000568586 A0A1W2PNU3 283 aaPredicted RBP29.18■■■□□ 2.26
RAB40C-211ENST00000568586 A0A1W2PQM1 296 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 NFKB1P19838 968 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 ACTN2P35609 894 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 EIF2S3P41091 472 aaKnown RBP29.18■■■□□ 2.26
RAB40C-211ENST00000568586 LRP8Q14114 963 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 PCSK7Q16549 785 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 DOK6Q6PKX4 331 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 ZNF438Q7Z4V0 828 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 TRIM74Q86UV6 250 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 ATXN7L3BQ96GX2 97 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 OR2M4Q96R27 311 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 OSBPL8Q9BZF1 889 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 ZNF711Q9Y462 761 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 RNF215Q9Y6U7 377 aa29.18■■■□□ 2.26
RAB40C-211ENST00000568586 B4DGG1 531 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 DNAJC6O75061 913 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 PMPCBO75439 489 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 MPOP05164 745 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 AK4P27144 223 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-211ENST00000568586 NAP1L1P55209 391 aaKnown RBP29.17■■■□□ 2.26
RAB40C-211ENST00000568586 RWDD2BP57060 319 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 GABREP78334 506 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 CCL7P80098 99 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 NR1D2Q14995 579 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 ALG3Q92685 438 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 HAUS1Q96CS2 278 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 ZNF578Q96N58 590 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-211ENST00000568586 LRRN3Q9H3W5 708 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 LRIT1Q9P2V4 623 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 PCDHGA8Q9Y5G5 932 aa29.17■■■□□ 2.26
RAB40C-211ENST00000568586 OAS3Q9Y6K5 1087 aaKnown RBP29.17■■■□□ 2.26
RAB40C-211ENST00000568586 D6RAR5 112 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 INPP4BO15327 924 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 WNT3AP56704 352 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 ERVPABLB-1P60509 514 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 PDPK2PQ6A1A2 396 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 CCDC70Q6NSX1 233 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 PID1Q7Z2X4 250 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 SPRED1Q7Z699 444 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 CCNJLQ8IV13 435 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 TXLNBQ8N3L3 684 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 GPR26Q8NDV2 337 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 ZDHHC1Q8WTX9 485 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 OXNAD1Q96HP4 312 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-211ENST00000568586 MRGPRX2Q96LB1 330 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms