RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 GCNT7Q6ZNI0 430 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 HSD11B1LQ7Z5J1 315 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 HORMAD1Q86X24 394 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 CDKL3Q8IVW4 592 aaPredicted RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 ZNF548Q8NEK5 533 aaPredicted RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 LPCAT1Q8NF37 534 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 NSMCE1Q8WV22 266 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 PBKQ96KB5 322 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 SPATA13Q96N96 652 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 SLC46A1Q96NT5 459 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 NAPGQ99747 312 aaPredicted RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 TDRD1Q9BXT4 1180 aaKnown RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 FAM117AQ9C073 453 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 POLR1EQ9GZS1 481 aaKnown RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 SLC25A51Q9H1U9 297 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 MBNL1Q9NR56 388 aaKnown RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 DKK3Q9UBP4 350 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 IL17BQ9UHF5 180 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 SSUH2Q9Y2M2 353 aa8.37□□□□□ -1.07
TSC2-223ENST00000568566 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
TSC2-223ENST00000568566 TRPM6Q9BX84 2022 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 C5orf60A6NFR6 353 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 NEMP2A6NFY4 417 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 CASC3O15234 703 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CLDN7O95471 211 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 PAK4O96013 591 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CPP00450 1065 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 IFNB1P01574 187 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 TPH1P17752 444 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 HNRNPA2B1P22626 353 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CASQ1P31415 396 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ADRA1AP35348 466 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 COILP38432 576 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CETN2P41208 172 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 PTGIRP43119 386 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 VPS41P49754 854 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 SRSF1Q07955 248 aaKnown RBP eCLIP8.36□□□□□ -1.07
TSC2-223ENST00000568566 MSLNQ13421 630 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CNGA3Q16281 694 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 CCNG2Q16589 344 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 DEFB133Q30KQ1 61 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 TMEM52BQ4KMG9 183 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 TMEM259Q4ZIN3 620 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 DENND5AQ6IQ26 1287 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 IGF2-ASQ6U949 168 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 RBM44Q6ZP01 1051 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 Q6ZSR6 202 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 EFL1Q7Z2Z2 1120 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 ABI3BPQ7Z7G0 1075 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 KLHL7Q8IXQ5 586 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 CBARPQ8N350 705 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 EXD3Q8N9H8 876 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 PLA2G15Q8NCC3 412 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 LRRN4CLQ8ND94 238 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 IPMKQ8NFU5 416 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ACTRT1Q8TDG2 376 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 MAGOHBQ96A72 148 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 PRR11Q96HE9 360 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 CCDC114Q96M63 670 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ZNF641Q96N77 438 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 FCRL5Q96RD9 977 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 TUBGCP5Q96RT8 1024 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 AGAP2Q99490 1192 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 KLF6Q99612 283 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 FICDQ9BVA6 458 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 DUSP23Q9BVJ7 150 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 DDX47Q9H0S4 455 aaKnown RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 GBA3Q9H227 469 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ATP13A3Q9H7F0 1226 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 SYNDIG1Q9H7V2 258 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ETNK1Q9HBU6 452 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 RSPH14Q9UHP6 348 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 PNMA8BQ9ULN7 279 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 TTC7AQ9ULT0 858 aaPredicted RBP8.36□□□□□ -1.07
TSC2-223ENST00000568566 SHOC2Q9UQ13 582 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ZNF148Q9UQR1 794 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 NEU2Q9Y3R4 380 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 ENTPD2Q9Y5L3 495 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
TSC2-223ENST00000568566 LOC285095A0A1B0GVY8 99 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 CCDC78A2IDD5 438 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 CTAGE9A4FU28 777 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 POM121BA6NF01 834 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 A6NNZ2 444 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 CDRT15L2A8MXV6 281 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 CCL22O00626 93 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 GCATO75600 419 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 TNFSF15O95150 251 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 SERPINA4P29622 427 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 HSPA9P38646 679 aaKnown RBP8.35□□□□□ -1.07
TSC2-223ENST00000568566 MMP12P39900 470 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 LIG3P49916 1009 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 PDX1P52945 283 aa8.35□□□□□ -1.07
TSC2-223ENST00000568566 HNRNPKP61978 463 aaKnown RBP eCLIP8.35□□□□□ -1.072e-8■■■□□ 16.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms