RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PDX1P52945 283 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 CTBSQ01459 385 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 PEX6Q13608 980 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 GALNT3Q14435 633 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 PRKD1Q15139 912 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 SLC14A2Q15849 920 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 KAZNQ674X7 775 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 C11orf63Q6NUN7 778 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 IGF2-ASQ6U949 168 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 SFTPA2Q8IWL1 248 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 KATNAL2Q8IYT4 538 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 Q8N9G6 341 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 ZNF248Q8NDW4 579 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 EXD1Q8NHP7 514 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 ZDHHC1Q8WTX9 485 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 PTCD2Q8WV60 388 aaKnown RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 SCARF2Q96GP6 870 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 PANX2Q96RD6 677 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 AGAP2Q99490 1192 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 FAM83DQ9H4H8 585 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 GLOD4Q9HC38 313 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 ASCL3Q9NQ33 180 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 SPATS2LQ9NUQ6 558 aaKnown RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 LRIT1Q9P2V4 623 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 PCDHGA8Q9Y5G5 932 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 RNF215Q9Y6U7 377 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 KIF26BQ2KJY2 2108 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 A0A1W2PQM1 296 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 RGSL1A5PLK6 1076 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 ZRANB2O95218 330 aaKnown RBP eCLIP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 IPO7O95373 1038 aaKnown RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 ASMTLO95671 621 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 AK4P27144 223 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 MLLT3P42568 568 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 SPINT3P49223 89 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 INHBCP55103 352 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 MAZP56270 477 aaKnown RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 CCZ1BP86790 482 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 CCZ1P86791 482 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 BIRC2Q13490 618 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 PCSK7Q16549 785 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 TFDP3Q5H9I0 405 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 FAM182AQ5T1J6 154 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 FOXR1Q6PIV2 292 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 B4GALNT4Q76KP1 1039 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 MARK2Q7KZI7 788 aaKnown RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 LYSMD3Q7Z3D4 306 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 KDELC2Q7Z4H8 507 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 SPRED1Q7Z699 444 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 CCDC50Q8IVM0 306 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 TFB1MQ8WVM0 346 aaKnown RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 LIN37Q96GY3 246 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 COX14Q96I36 57 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 RBM41Q96IZ5 413 aaKnown RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 TMEM74Q96NL1 305 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 TRIB3Q96RU7 358 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 STRADBQ9C0K7 418 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 SAE1Q9UBE0 346 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 PYCARDQ9ULZ3 195 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 TFR2Q9UP52 801 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
CMTM3-215ENST00000568477 NBEAQ8NFP9 2946 aa14.35□□□□□ -0.11
CMTM3-215ENST00000568477 AHCTF1Q8WYP5 2266 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 MTSS1O43312 755 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 NDUFA10O95299 355 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 FGF1P05230 155 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 PTPN3P26045 913 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 ACTR1BP42025 376 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 ACTR1AP61163 376 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 CDK18Q07002 472 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 EIF3IQ13347 325 aaKnown RBP14.34□□□□□ -0.11
CMTM3-215ENST00000568477 PYCR3Q53H96 274 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 TEX44Q53QW1 395 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 HENMT1Q5T8I9 393 aaKnown RBP14.34□□□□□ -0.11
CMTM3-215ENST00000568477 CCDC70Q6NSX1 233 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 B3GNT8Q7Z7M8 397 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 DAAM2Q86T65 1068 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 C17orf82Q86X59 251 aaPredicted RBP14.34□□□□□ -0.11
CMTM3-215ENST00000568477 TMTC1Q8IUR5 882 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 SPACA3Q8IXA5 215 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 RCOR2Q8IZ40 523 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 P3H4Q92791 437 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 TADA1Q96BN2 335 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 CRELD1Q96HD1 420 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 NAF1Q96HR8 494 aaKnown RBP14.34□□□□□ -0.11
CMTM3-215ENST00000568477 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 SLC46A1Q96NT5 459 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 WDR24Q96S15 920 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 FOXP3Q9BZS1 431 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 ZFYVE1Q9HBF4 777 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms