RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CTPS1P17812 591 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 ITGAXP20702 1163 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 CD70P32970 193 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 MAPK8P45983 427 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 CSNK1DP48730 415 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 RPL26P61254 145 aaKnown RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 ATP6V0D1P61421 351 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 XIAPP98170 497 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 BTKQ06187 659 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 RAD51Q06609 339 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PLEKHG6Q3KR16 790 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 LYSMD3Q7Z3D4 306 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 METTL3Q86U44 580 aaKnown RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PTGR2Q8N8N7 351 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 CEP70Q8NHQ1 597 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 ACTRT2Q8TDY3 377 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 EID2BQ96D98 161 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 GPR21Q99679 349 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 SMG9Q9H0W8 520 aaKnown RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 ABCB8Q9NUT2 735 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 G3BP2Q9UN86 482 aaKnown RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 FIS1Q9Y3D6 152 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 IRAK3Q9Y616 596 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 UBXN8O00124 270 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 UBFD1O14562 309 aaKnown RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 OR1I1O60431 355 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 KERAO60938 352 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 KRT36O76013 467 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PSMG1O95456 288 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 FGBP02675 491 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 ALPIP09923 528 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 CD9P21926 228 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 CLCN4P51793 760 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 ERVFC1P60507 584 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 BCL2L1Q07817 233 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 RCN1Q15293 331 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 RIPOR1Q6ZS17 1223 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 RAB44Q7Z6P3 723 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 STAG3L4Q8TBR4 150 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PANX3Q96QZ0 392 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 MEAF6Q9HAF1 191 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 HELZP42694 1942 aaKnown RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 HTRA2O43464 458 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 VPS26AO75436 327 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 EN2P19622 333 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 CCR2P41597 374 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 ADARP55265 1226 aaKnown RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 ACTR3P61158 418 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 CTSL3PQ5NE16 218 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 C1orf146Q5VVC0 180 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 NKAPQ8N5F7 415 aaKnown RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 RP9Q8TA86 221 aaKnown RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 TACO1Q9BSH4 297 aaKnown RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 ZBTB26Q9HCK0 441 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 INTS6Q9UL03 887 aaKnown RBP18.04■□□□□ 0.48
SMPD3-211ENST00000568373 TRAF6Q9Y4K3 522 aa18.04■□□□□ 0.48
SMPD3-211ENST00000568373 HIDE1A8MVS5 230 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 SOCS5O75159 536 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CYBBP04839 570 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CD1EP15812 388 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 PTGER3P43115 390 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 INHBCP55103 352 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CACNG1Q06432 222 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 PFKFB4Q16877 469 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 PPM1LQ5SGD2 360 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 SNX32Q86XE0 403 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 DEFB107AQ8IZN7 70 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 PELI3Q8N2H9 469 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 KCNV2Q8TDN2 545 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 ASB2Q96Q27 587 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 HCFC1R1Q9NWW0 138 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 GALPQ9UBC7 116 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 RNF112Q9ULX5 631 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 COPG1Q9Y678 874 aaKnown RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 COMMD10Q9Y6G5 202 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 MTCL1Q9Y4B5 1905 aaKnown RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 A0A0J9YYE9 177 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CCNT2O60583 730 aaKnown RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 NIPSNAP2O75323 286 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 ZNF821O75541 412 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CSPG5O95196 566 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 IGSF6O95976 241 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 TRBC1P01850 177 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 TSPAN8P19075 237 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 PTDSS1P48651 473 aaKnown RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 HERC3Q15034 1050 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 PGM2L1Q6PCE3 622 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 TAS2R42Q7RTR8 314 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CMTM8Q8IZV2 173 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 STK40Q8N2I9 435 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 MRPL43Q8N983 215 aaKnown RBP18.03■□□□□ 0.48
SMPD3-211ENST00000568373 KCNJ9Q92806 393 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 LMLNQ96KR4 655 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 MARK4Q96L34 752 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 SLC30A3Q99726 388 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 ATP13A3Q9H7F0 1226 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 STOML1Q9UBI4 398 aa18.03■□□□□ 0.48
SMPD3-211ENST00000568373 CDH22Q9UJ99 828 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms