RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 TGIF1Q15583 401 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 PCSK7Q16549 785 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 MAP9Q49MG5 647 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 ZNF648Q5T619 568 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 NKAIN2Q5VXU1 208 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 ALS2CLQ60I27 953 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 ALG1LQ6GMV1 187 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 ADAMTSL4Q6UY14 1074 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 HDAC11Q96DB2 347 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 OR2M4Q96R27 311 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 NUDT22Q9BRQ3 303 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 MAK16Q9BXY0 300 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 TRNAU1APQ9NX07 287 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 SHOC2Q9UQ13 582 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 LOXL2Q9Y4K0 774 aa12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 OAS3Q9Y6K5 1087 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-208ENST00000567843 F5H423 210 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 PPM1DO15297 605 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 NUDT21O43809 227 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 EML2O95834 649 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 IVLP07476 585 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 ZNF30P17039 623 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 CES1P23141 567 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 NOP2P46087 812 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 PPIDQ08752 370 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 CLN3Q13286 438 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 ODF2Q5BJF6 829 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 KAZNQ674X7 775 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 SLC9A4Q6AI14 798 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 PCSK4Q6UW60 755 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 MFSD7Q6UXD7 560 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 CHST15Q7LFX5 561 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 NAGSQ8N159 534 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 RCBTB1Q8NDN9 531 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 TMEM74Q96NL1 305 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 WDR24Q96S15 920 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 MLPHQ9BV36 600 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 UBP1Q9NZI7 540 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 ZNHIT2Q9UHR6 403 aa12.15□□□□□ -0.46
GTF3C1-208ENST00000567843 FADS2P1A8MWK0 482 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 ANKRD66B4E2M5 251 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 AKR1B15C9JRZ8 316 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 SPOPO43791 374 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 PNLIPP16233 465 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 COMTP21964 271 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 CA4P22748 312 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 TEAD1P28347 426 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 CCKBRP32239 447 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 IFI35P80217 286 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 ZFP36L1Q07352 338 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 C16orf72Q14CZ0 275 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 TAF1BQ53T94 588 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 ZNF765Q7L2R6 523 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 LYSMD3Q7Z3D4 306 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 CLEC14AQ86T13 490 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 C17orf82Q86X59 251 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 ZFAND4Q86XD8 727 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 GALNT13Q8IUC8 556 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 SLITRK4Q8IW52 837 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 RHOT2Q8IXI1 618 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 EXD1Q8NHP7 514 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 SPATA22Q8NHS9 363 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 FATE1Q969F0 183 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 DPH1Q9BZG8 443 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 CDH19Q9H159 772 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 FAM83DQ9H4H8 585 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 AMACRQ9UHK6 382 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 LCMT1Q9UIC8 334 aa12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 CNOT6Q9ULM6 557 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-208ENST00000567843 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 PRAMEF33A0A0G2JMD5 474 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 TEX51A0A1B0GUA7 166 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 TMX2-CTNND1H3BSU7 103 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 SNX2O60749 519 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 PRAMEF10O60809 474 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 PMPCBO75439 489 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 C1QL1O75973 258 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 MTA2O94776 668 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 CPNE6O95741 557 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 MT-CYBP00156 380 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 CCL4P13236 92 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 ACP5P13686 325 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 PECAM1P16284 738 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 CD1CP29017 333 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 ARHGAP25P42331 645 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 MAGEA1P43355 309 aa12.13□□□□□ -0.47
GTF3C1-208ENST00000567843 SPINT3P49223 89 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms