RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TM7SF2O76062 418 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 AOC1P19801 751 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 MAPK8P45983 427 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 PLK1P53350 603 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 TMEM259Q4ZIN3 620 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 CFAP157Q5JU67 520 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 C17orf80Q9BSJ5 609 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 SLC46A2Q9BY10 475 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 NCKIPSDQ9NZQ3 722 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 ARMCX1Q9P291 453 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 CRYL1Q9Y2S2 319 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 BPTFQ12830 3046 aa23.21■■□□□ 1.31
LINC00543-201ENST00000567234 CDH23Q9H251 3354 aa23.2■■□□□ 1.31
LINC00543-201ENST00000567234 CHD9Q3L8U1 2897 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 H7C0S8 307 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 RPL14P50914 215 aaKnown RBP23.2■■□□□ 1.3
LINC00543-201ENST00000567234 SEMA3AQ14563 771 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 METTL21CQ5VZV1 264 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 ZNF549Q6P9A3 640 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 SPATA6LQ8N4H0 392 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 AARSD1Q9BTE6 412 aaKnown RBP23.2■■□□□ 1.3
LINC00543-201ENST00000567234 VTI1BQ9UEU0 232 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 TAGLN3Q9UI15 199 aa23.2■■□□□ 1.3
LINC00543-201ENST00000567234 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.19■■□□□ 1.3
LINC00543-201ENST00000567234 SOBPA7XYQ1 873 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 MATN2O00339 956 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 CTNNB1P35222 781 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 RANBP1P43487 201 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 ALDH18A1P54886 795 aaKnown RBP23.19■■□□□ 1.3
LINC00543-201ENST00000567234 ARL13AQ5H913 290 aaPredicted RBP23.19■■□□□ 1.3
LINC00543-201ENST00000567234 TREML1Q86YW5 311 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 SLC22A9Q8IVM8 553 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 APCDD1Q8J025 514 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 TXNDC5Q8NBS9 432 aaKnown RBP23.19■■□□□ 1.3
LINC00543-201ENST00000567234 CNDP1Q96KN2 507 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 C19orf43Q9BQ61 176 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 COG4Q9H9E3 785 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 FCF1Q9Y324 198 aaKnown RBP23.19■■□□□ 1.3
LINC00543-201ENST00000567234 RWDD3Q9Y3V2 267 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 DOCK6Q96HP0 2047 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 PFDN6O15212 129 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 CCL16O15467 120 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 PIGNO95427 931 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 CYBBP04839 570 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 CLCN4P51793 760 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 UBE3AQ05086 875 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 USP4Q13107 963 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 TTC30BQ8N4P2 665 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 SLC22A17Q8WUG5 538 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 WDR60Q8WVS4 1066 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 GFM2Q969S9 779 aaKnown RBP23.19■■□□□ 1.3
LINC00543-201ENST00000567234 MAGEE1Q9HCI5 957 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 ABCB8Q9NUT2 735 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 PTTG2Q9NZH5 202 aa23.19■■□□□ 1.3
LINC00543-201ENST00000567234 HDAC3O15379 428 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 LMAN2Q12907 356 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 TMEM207Q6UWW9 146 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 RINLQ6ZS11 566 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 SCUBE1Q8IWY4 988 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 KBTBD2Q8IY47 623 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 ANKRD49Q8WVL7 239 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 LMCD1Q9NZU5 365 aa23.18■■□□□ 1.3
LINC00543-201ENST00000567234 HIDE1A8MVS5 230 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 STX7O15400 261 aaKnown RBP23.17■■□□□ 1.3
LINC00543-201ENST00000567234 IPO13O94829 963 aaKnown RBP23.17■■□□□ 1.3
LINC00543-201ENST00000567234 MT-CO1P00395 513 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 CHRNGP07510 517 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 TIAL1Q01085 375 aaKnown RBP eCLIP23.17■■□□□ 1.3
LINC00543-201ENST00000567234 ARMC12Q5T9G4 340 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PLPP4Q5VZY2 271 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 IZUMO2Q6UXV1 221 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 LSMEM2Q8N112 164 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PNPLA1Q8N8W4 532 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 NAT14Q8WUY8 206 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 LPGAT1Q92604 370 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 JADE3Q92613 823 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 HIC2Q96JB3 615 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 POMKQ9H5K3 350 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 TLR9Q9NR96 1032 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 NRG2O14511 850 aaPredicted RBP23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PGLSO95336 258 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PYGLP06737 847 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 CA3P07451 260 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 GJA1P17302 382 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PTPN2P17706 415 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 TFEBP19484 476 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 HOXA9P31269 272 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 TTPAP49638 278 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 SFSWAPQ12872 951 aaKnown RBP23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PLEKHG6Q3KR16 790 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 SEL1L3Q68CR1 1132 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 TRIM67Q6ZTA4 783 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 ISCA2Q86U28 154 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 SHKBP1Q8TBC3 707 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 SPPL3Q8TCT6 385 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 BHMTQ93088 406 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 BTBD9Q96Q07 612 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PCDHB9Q9Y5E1 797 aa23.17■■□□□ 1.3
LINC00543-201ENST00000567234 PEX1O43933 1283 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 SOCS5O75159 536 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms