RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SPATA17Q96L03 361 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 MUC13Q9H3R2 512 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 POLR3BQ9NW08 1133 aaPredicted RBP16.72■□□□□ 0.27
CMTM3-213ENST00000566756 PCDHGB4Q9UN71 923 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 PCDHGB5Q9Y5G0 923 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 DRGXA6NNA5 263 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 H6PDO95479 791 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 GLP2RO95838 553 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 HAPLN1P10915 354 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 HSD17B1P14061 328 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ZNF23P17027 643 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 KCNC1P48547 511 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ATXN3P54252 364 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 YBEYP58557 167 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ATP6V0D1P61421 351 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ITKQ08881 620 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 GRIK2Q13002 908 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 DDR2Q16832 855 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MYLK3Q32MK0 819 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 KANK2Q63ZY3 851 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 IYDQ6PHW0 289 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 NECAB2Q7Z6G3 386 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ZFP28Q8NHY6 868 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 HM13Q8TCT9 377 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 PTERQ96BW5 349 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 NMD3Q96D46 503 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 IGSF21Q96ID5 467 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 HIC2Q96JB3 615 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MPP4Q96JB8 637 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 B3GALT6Q96L58 329 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 CEP295NLQ96MC4 621 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ANKRD60Q9BZ19 345 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 GRIP2Q9C0E4 1043 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 AKTIPQ9H8T0 292 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 RC3H2Q9HBD1 1191 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 PNPLA3Q9NST1 481 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MARCH4Q9P2E8 410 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 UXTQ9UBK9 157 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 CNOT6Q9ULM6 557 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 TMCO1Q9UM00 188 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 RNF11Q9Y3C5 154 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 BACE2Q9Y5Z0 518 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ASLP04424 464 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ALDOCP09972 364 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 YWHAQP27348 245 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 RPS6KA3P51812 740 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 SLC7A2P52569 658 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MAXP61244 160 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 RALGDSQ12967 914 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 GK3PQ14409 553 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 INTS11Q5TA45 600 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 CLEC6AQ6EIG7 209 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 SLC8B1Q6J4K2 584 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 RSPO2Q6UXX9 243 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 TAS1R1Q7RTX1 841 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 ERMP1Q7Z2K6 904 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MIER2Q8N344 545 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MFSD2AQ8NA29 543 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 PABPC5Q96DU9 382 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 OLA1Q9NTK5 396 aaKnown RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 CCM2LQ9NUG4 571 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-213ENST00000566756 MTRRQ9UBK8 725 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 DNAJC15Q9Y5T4 150 aa16.71■□□□□ 0.27
CMTM3-213ENST00000566756 A0A0J9YYE9 177 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 AZIN1O14977 448 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 CD3EAPO15446 510 aaKnown RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 HNRNPRO43390 633 aaKnown RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 RPP40O75818 363 aaKnown RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 TMCC1O94876 653 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 CDK14O94921 469 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 C7P10643 843 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF37AP17032 561 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 MAPKAPK2P49137 400 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 SH3BP2P78314 561 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 IHHQ14623 411 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 TRIP4Q15650 581 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 TYSND1Q2T9J0 566 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 ALG1LQ6GMV1 187 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 PHYKPLQ8IUZ5 450 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 BRSK1Q8TDC3 778 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 PSMG2Q969U7 264 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF599Q96NL3 588 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 KLHL5Q96PQ7 755 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 POLR1EQ9GZS1 481 aaKnown RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 INTS10Q9NVR2 710 aaKnown RBP16.7■□□□□ 0.26
CMTM3-213ENST00000566756 GID8Q9NWU2 228 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 ATXN10Q9UBB4 475 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 SNX13Q9Y5W8 968 aa16.7■□□□□ 0.26
CMTM3-213ENST00000566756 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 H3BNH8 94 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 VNN2O95498 520 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 HDCP19113 662 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ITGB8P26012 769 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ALDH3B2P48448 385 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TIAL1Q01085 375 aaKnown RBP eCLIP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 SERINC3Q13530 473 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ALFQ53S48 1182 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 MTX3Q5HYI7 312 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 LCN8Q6JVE9 175 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms