RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 G6PDP11413 515 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 CYP19A1P11511 503 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 PRLRP16471 622 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 DDX5P17844 614 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 UBA1P22314 1058 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 RAD23BP54727 409 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 SELENOVP59797 346 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 ADORA2A-AS1P86434 159 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 SREBF2Q12772 1141 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 LETM2Q2VYF4 491 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 KRBOX4Q5JUW0 171 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 CST9LP1Q5W188 147 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 NUGGCQ68CJ6 796 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 YTHDF3Q7Z739 585 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 THNSL1Q8IYQ7 743 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 TC2NQ8N9U0 490 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 GOT1L1Q8NHS2 421 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 LPGAT1Q92604 370 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 SIPA1Q96FS4 1042 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 ST6GALNAC4Q9H4F1 302 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 MAGIXQ9H6Y5 334 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 DNAJC18Q9H819 358 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 ADARB2Q9NS39 739 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 TMEM51Q9NW97 253 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 ARGLU1Q9NWB6 273 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 SLC9A2Q9UBY0 812 aa5.06□□□□□ -1.6
CNOT1-209ENST00000566240 WBP11Q9Y2W2 641 aaKnown RBP5.06□□□□□ -1.6
CNOT1-209ENST00000566240 KANSL1LA0AUZ9 987 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 KCNU1A8MYU2 1149 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 KDM4EB2RXH2 506 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 E5RJQ4 531 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 M0QZ24 198 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 CLGNO14967 610 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 LDB2O43679 373 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 TADA2AO75478 443 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 HSP90AB1P08238 724 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 EIF2S3P41091 472 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 MATR3P43243 847 aaKnown RBP eCLIP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 RASSF2P50749 326 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 ARSEP51690 589 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 CSE1LP55060 971 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 P2RX3P56373 397 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 EIF2S3LQ2VIR3 472 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 SUPT20HL1Q3ZLR7 823 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 PARM1Q6UWI2 310 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 MON1BQ7L1V2 547 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 CAMKMTQ7Z624 323 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 OR8H3Q8N146 312 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 TRIB2Q92519 343 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 FER1L6-AS2Q96M78 137 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 CFAP57Q96MR6 1250 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 RAB3IPQ96QF0 476 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 SH3GL2Q99962 352 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 PRSS22Q9GZN4 317 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 SPATC1LQ9H0A9 340 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 CLK4Q9HAZ1 481 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 FZD3Q9NPG1 666 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 HAO2Q9NYQ3 351 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 OR6C3Q9NZP0 311 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 HACL1Q9UJ83 578 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 GTF3C4Q9UKN8 822 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 TTC7AQ9ULT0 858 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 BTBD3Q9Y2F9 522 aa5.05□□□□□ -1.6
CNOT1-209ENST00000566240 SRPRBQ9Y5M8 271 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.05□□□□□ -1.6
CNOT1-209ENST00000566240 ZMYM2Q9UBW7 1377 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 MAGEB17A8MXT2 336 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 MAP2K7O14733 419 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 DIAPH2O60879 1101 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 ZWINTO95229 277 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 C22orf31O95567 290 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 NUDT3O95989 172 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 MUTP22033 750 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 GNLYP22749 145 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 MC5RP33032 325 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 GDF5P43026 501 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 TNNT3P45378 269 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-209ENST00000566240 RBP5P82980 135 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 DDR1Q08345 913 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 SPOCK1Q08629 439 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 BFSP1Q12934 665 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 MYBPC2Q14324 1141 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 SNAPC1Q16533 368 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 CBWD6Q4V339 395 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 CBWD3Q5JTY5 395 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 WASHC2DQ5SRD0 308 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 DCAF12L2Q5VW00 463 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 DHRS7BQ6IAN0 325 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-209ENST00000566240 DCLRE1AQ6PJP8 1040 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 DLK2Q6UY11 383 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 B3GNT6Q6ZMB0 384 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 RBPMS2Q6ZRY4 209 aaKnown RBP5.04□□□□□ -1.6
CNOT1-209ENST00000566240 SHFQ7M4L6 423 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 RD3Q7Z3Z2 195 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 LDB1Q86U70 411 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-209ENST00000566240 XXYLT1Q8NBI6 393 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 TSPAN14Q8NG11 270 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 OR1J2Q8NGS2 313 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 KIF18AQ8NI77 898 aa5.04□□□□□ -1.6
CNOT1-209ENST00000566240 HM13Q8TCT9 377 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms