RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CNOT6Q9ULM6 557 aaKnown RBP23.62■■□□□ 1.37
RAB40C-209ENST00000565511 TMX2-CTNND1H3BSU7 103 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 KCNK1O00180 336 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 TMEM253P0C7T8 217 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 JMJD7P0C870 316 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 CSF2RBP32927 897 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 MAN1A1P33908 653 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 ACTR1BP42025 376 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 EPHB1P54762 984 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 ACTR1AP61163 376 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 RHDQ02161 417 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 CFHR1Q03591 330 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 LY6DQ14210 128 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 MESDQ14696 234 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 QPCTQ16769 361 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 PYCR3Q53H96 274 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 TAF1BQ53T94 588 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-209ENST00000565511 NKAIN2Q5VXU1 208 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 CCDC13Q8IYE1 715 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 RCBTB1Q8NDN9 531 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 CCDC97Q96F63 343 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-209ENST00000565511 RNF157Q96PX1 679 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 PCDH9Q9HC56 1237 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 SPTLC3Q9NUV7 552 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 ACSL6Q9UKU0 697 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 PRKAB1Q9Y478 270 aa23.61■■□□□ 1.37
RAB40C-209ENST00000565511 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.61■■□□□ 1.375e-6■■■■□ 23
RAB40C-209ENST00000565511 RHPN2P1A8MT19 583 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 FADS2P1A8MWK0 482 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 C9orf172C9J069 976 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 ZIC2O95409 532 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-209ENST00000565511 JCHAINP01591 159 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 KRT7P08729 469 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 KRT10P13645 584 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 ZNF30P17039 623 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 CD1CP29017 333 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 ALDH4A1P30038 563 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 CD86P42081 329 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 NPNTQ6UXI9 565 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 B4GALNT4Q76KP1 1039 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 ZFAND4Q86XD8 727 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 ZNF761Q86XN6 746 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-209ENST00000565511 USP7Q93009 1102 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 TMEM9Q9P0T7 183 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 AMACRQ9UHK6 382 aa23.6■■□□□ 1.37
RAB40C-209ENST00000565511 LRRD1A4D1F6 860 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CPNE6O95741 557 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 ATP1A1P05023 1023 aaKnown RBP23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CCL4P13236 92 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 MAPK10P53779 464 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CCDC81Q6ZN84 652 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CCNYQ8ND76 341 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 SLC35G2Q8TBE7 412 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 EID2BQ96D98 161 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CCDC74BQ96LY2 380 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 LYSMD1Q96S90 227 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CCNL2Q96S94 520 aaPredicted RBP23.59■■□□□ 1.37
RAB40C-209ENST00000565511 CDH19Q9H159 772 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 WDR70Q9NW82 654 aa23.59■■□□□ 1.37
RAB40C-209ENST00000565511 TRBV23OR9-2A0A075B6M9 112 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 IGHV5-10-1A0A0J9YXX1 117 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 SSU72P8A0A1W2PR75 194 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 NVLO15381 856 aaKnown RBP23.58■■□□□ 1.37
RAB40C-209ENST00000565511 DNAJC6O75061 913 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 WT1P19544 449 aaPredicted RBP23.58■■□□□ 1.37
RAB40C-209ENST00000565511 ARSDP51689 593 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 IFI35P80217 286 aaPredicted RBP23.58■■□□□ 1.37
RAB40C-209ENST00000565511 PPIDQ08752 370 aaKnown RBP23.58■■□□□ 1.37
RAB40C-209ENST00000565511 GALNT3Q14435 633 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 HENMT1Q5T8I9 393 aaKnown RBP23.58■■□□□ 1.37
RAB40C-209ENST00000565511 SLC9A4Q6AI14 798 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 VASH2Q86V25 355 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 NLRP8Q86W28 1048 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 MAP7D3Q8IWC1 876 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 NRSN1Q8IZ57 195 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 OR8K1Q8NGG5 319 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.58■■□□□ 1.37
RAB40C-209ENST00000565511 HYOU1Q9Y4L1 999 aa23.58■■□□□ 1.37
RAB40C-209ENST00000565511 IGHV1OR21-1A0A087WYE8 117 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 C1orf232A0A0U1RR37 186 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 PLA2G2AP14555 144 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 MX2P20592 715 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 CES1P23141 567 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 MPSTP25325 297 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 SPINT3P49223 89 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 ZFYVE27Q5T4F4 411 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 PIM3Q86V86 326 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 VSTM4Q8IW00 320 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 NDUFAF2Q8N183 169 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 SLC37A2Q8TED4 501 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 TRIB3Q96RU7 358 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 ABHD10Q9NUJ1 306 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 HEY1Q9Y5J3 304 aa23.57■■□□□ 1.36
RAB40C-209ENST00000565511 PIRTP0C851 137 aa23.56■■□□□ 1.36
RAB40C-209ENST00000565511 LIPCP11150 499 aa23.56■■□□□ 1.36
RAB40C-209ENST00000565511 NOP2P46087 812 aaKnown RBP23.56■■□□□ 1.36
RAB40C-209ENST00000565511 RPL26P61254 145 aaKnown RBP23.56■■□□□ 1.36
RAB40C-209ENST00000565511 ZNF648Q5T619 568 aaPredicted RBP23.56■■□□□ 1.36
RAB40C-209ENST00000565511 LYSMD3Q7Z3D4 306 aa23.56■■□□□ 1.36
RAB40C-209ENST00000565511 GALNT13Q8IUC8 556 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms