RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 HLA-DQB2P05538 268 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 PIRTP0C851 137 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 CCL4P13236 92 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 TEAD1P28347 426 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 CSTF2P33240 577 aaKnown RBP eCLIP6.37□□□□□ -1.39
TCF4-228ENST00000565393 MAN1A1P33908 653 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 GPR3P46089 330 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 SPINT3P49223 89 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 STC1P52823 247 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 SKOR1P84550 965 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 NFATC2Q13469 925 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 LRP8Q14114 963 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 GALNT3Q14435 633 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 IHHQ14623 411 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 PDK1Q15118 436 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 LLGL1Q15334 1064 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 QPCTQ16769 361 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 ASTE1Q2TB18 679 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 SNAP47Q5SQN1 464 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 MANEAQ5SRI9 462 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 KIAA1614Q5VZ46 1190 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 KAZNQ674X7 775 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 NPNTQ6UXI9 565 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 ZNF574Q6ZN55 896 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 ZNF765Q7L2R6 523 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 TMPRSS9Q7Z410 1059 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 NT5DC3Q86UY8 548 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 C17orf82Q86X59 251 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 ZNF761Q86XN6 746 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 RHOT2Q8IXI1 618 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 RHOT1Q8IXI2 618 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 NAGSQ8N159 534 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 CNTD1Q8N815 330 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 RNF214Q8ND24 703 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 RCBTB1Q8NDN9 531 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 JPH3Q8WXH2 748 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 NCSTNQ92542 709 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 FATE1Q969F0 183 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 HDAC11Q96DB2 347 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 SCARF2Q96GP6 870 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 NUDT22Q9BRQ3 303 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 TDRD1Q9BXT4 1180 aaKnown RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 CEP41Q9BYV8 373 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 GPR63Q9BZJ6 419 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 STN1Q9H668 368 aaKnown RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 ZFYVE1Q9HBF4 777 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 ABHD10Q9NUJ1 306 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 DDX56Q9NY93 547 aaKnown RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 UBP1Q9NZI7 540 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 SHOC2Q9UQ13 582 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 HYOU1Q9Y4L1 999 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 CACNA1EQ15878 2313 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 RGSL1A5PLK6 1076 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 PPP1R12AO14974 1030 aaPredicted RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 GRID2O43424 1007 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SPOPO43791 374 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 DNAJC6O75061 913 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 PMPCBO75439 489 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SOD1P00441 154 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SLC4A1P02730 911 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 FGF3P11487 239 aaPredicted RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 ACP5P13686 325 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 ETV5P41161 510 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SLC1A1P43005 524 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 MAGEA1P43355 309 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 TNNT3P45378 269 aaPredicted RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 MAPK9P45984 424 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 LIMK2P53671 638 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 CDK18Q07002 472 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 PPIDQ08752 370 aaKnown RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 ZBTB17Q13105 803 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 C16orf72Q14CZ0 275 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 CLPPQ16740 277 aaPredicted RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 TEX44Q53QW1 395 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 ZNF648Q5T619 568 aaPredicted RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 ALS2CLQ60I27 953 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 ALG1LQ6GMV1 187 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 TMEM71Q6P5X7 295 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 IYDQ6PHW0 289 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 BZW1Q7L1Q6 419 aaKnown RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 PID1Q7Z2X4 250 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 LYSMD3Q7Z3D4 306 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SLC9B2Q86UD5 537 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 FAM129CQ86XR2 697 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 VSTM4Q8IW00 320 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 RAVER1Q8IY67 606 aaKnown RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 ZNF843Q8N446 348 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 PLD5Q8N7P1 536 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 AGBL5Q8NDL9 886 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 CCDC112Q8NEF3 446 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 OR4D9Q8NGE8 314 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 OR10G6Q8NH81 332 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SPATA22Q8NHS9 363 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SH3KBP1Q96B97 665 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 FAF2Q96CS3 445 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 WBP1Q96G27 269 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 COX14Q96I36 57 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 CCDC74BQ96LY2 380 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 TTC25Q96NG3 672 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms