RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 TRAFD1O14545 582 aaPredicted RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LDB2O43679 373 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PI15O43692 258 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ITM2AO43736 263 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TMCC1O94876 653 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SNUPNO95149 360 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KLHL2O95198 593 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CBX6O95503 412 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 APODP05090 189 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LTA4HP09960 611 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TYRP14679 529 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ALOX15P16050 662 aaPredicted RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CALB2P22676 271 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GLDCP23378 1020 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PTPN4P29074 926 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GMPRP36959 345 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OPRD1P41143 372 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC6A11P48066 632 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GLRBP48167 497 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SCNN1BP51168 640 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GALK1P51570 392 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TAS2R39P59534 338 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RHOAP61586 193 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GRSF1Q12849 480 aaKnown RBP eCLIP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CDH18Q13634 790 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FAM83EQ2M2I3 478 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RALGPS1Q5JS13 557 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AGAP9Q5VTM2 703 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LIPMQ5VYY2 423 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CXorf57Q6NSI4 855 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FAM45BPQ6NSW5 357 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CNSTQ6PJW8 725 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AFTPHQ6ULP2 937 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PTAR1Q7Z6K3 402 aaPredicted RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C12orf40Q86WS4 652 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CILP2Q8IUL8 1156 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FAM217AQ8IXS0 508 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CENPLQ8N0S6 344 aaPredicted RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KIAA1958Q8N8K9 716 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DCAF4L2Q8NA75 395 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LPCAT1Q8NF37 534 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PJA1Q8NG27 643 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OR52K2Q8NGK3 314 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GPR150Q8NGU9 434 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FAM45AQ8TCE6 357 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 BRSK1Q8TDC3 778 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DDI1Q8WTU0 396 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 STYXQ8WUJ0 223 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HDAC10Q969S8 669 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RMDN1Q96DB5 314 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MSANTD3Q96H12 275 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NSL1Q96IY1 281 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DNAJC1Q96KC8 554 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TMEM237Q96Q45 408 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PHF12Q96QT6 1004 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SORT1Q99523 831 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 P2RY13Q9BPV8 354 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MRPL57Q9BQC6 102 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TDRD1Q9BXT4 1180 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ADGRE3Q9BY15 652 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LMAN1LQ9HAT1 526 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NOD2Q9HC29 1040 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CATSPERZQ9NTU4 200 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OXSMQ9NWU1 459 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HACD3Q9P035 362 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 XPR1Q9UBH6 696 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LNPEPQ9UIQ6 1025 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 VPS28Q9UK41 221 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TRIM33Q9UPN9 1127 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RUVBL2Q9Y230 463 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 STK38LQ9Y2H1 464 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SIT1Q9Y3P8 196 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KIAA1549LQ6ZVL6 1849 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NBEAQ8NFP9 2946 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CACNA1IQ9P0X4 2223 aa7.42□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GPR179Q6PRD1 2367 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZNF106Q9H2Y7 1883 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SCN8AQ9UQD0 1980 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CCDC162PA2VCL2 907 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SHISA7A6NL88 538 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C2orf81A6NN90 581 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TRIM24O15164 1050 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PFDN6O15212 129 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CD3EAPO15446 510 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HOXC11O43248 304 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MGRN1O60291 552 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TULP3O75386 442 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GJB3O75712 270 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 WFS1O76024 890 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GOT2P00505 430 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 EGFP01133 1207 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SERPINA6P08185 405 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KRT16P08779 473 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RBP1P09455 135 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ESRRAP11474 423 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AOC1P19801 751 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms