RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 RAB20Q9NX57 234 aa5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 SIRPGQ9P1W8 387 aa5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 APOBEC3BQ9UH17 382 aaKnown RBP5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 VPS28Q9UK41 221 aa5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 CNOT11Q9UKZ1 510 aaKnown RBP5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 NAALADL1Q9UQQ1 740 aa5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 LOXL2Q9Y4K0 774 aa5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 APCP25054 2843 aa5.24□□□□□ -1.57
TUBGCP4-209ENST00000564511 A0A1W2PQM1 296 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 IGLON5A6NGN9 336 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 KCNU1A8MYU2 1149 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 C22orf46C9J442 243 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 M0QYT0 321 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 RNF103O00237 685 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 O00370 1275 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 MAPK13O15264 365 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 MTSS1O43312 755 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CALUO43852 315 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 AGFG2O95081 481 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 RPLP0P05388 317 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 VDRP11473 427 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 SRCP12931 536 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CTSEP14091 401 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 PDCP20941 246 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 NR2F2P24468 414 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CCKBRP32239 447 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 ETV5P41161 510 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 FGL2Q14314 439 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 TCEA2Q15560 299 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 ZXDCQ2QGD7 858 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 RABGAP1LQ5R372 815 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 FAXCQ5TGI0 409 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 SYPL2Q5VXT5 272 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CXorf57Q6NSI4 855 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 KIAA1161Q6NSJ0 714 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 ETV3LQ6ZN32 361 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 STK32CQ86UX6 486 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 FAM186BQ8IYM0 893 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 GRAMD1CQ8IYS0 662 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 ATP6V0D2Q8N8Y2 350 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 Q8N9G6 341 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CHST14Q8NCH0 376 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 KIAA0895Q8NCT3 520 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 FBXL13Q8NEE6 735 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 C9orf43Q8TAL5 461 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 SLC35F5Q8WV83 523 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 ALG14Q96F25 216 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 EEF2KMTQ96G04 330 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 PPP1R16AQ96I34 528 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 FAXDC2Q96IV6 333 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 BTN2A3PQ96KV6 586 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 RPRD1AQ96P16 312 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 RBM15Q96T37 977 aaKnown RBP eCLIP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CMKLR1Q99788 373 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 LRRC61Q9BV99 259 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 CLPBQ9H078 707 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 LRRN3Q9H3W5 708 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 MAGEF1Q9HAY2 307 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 EXOC1Q9NV70 894 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 FOXJ2Q9P0K8 574 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 SLC12A6Q9UHW9 1150 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 TMEFF2Q9UIK5 374 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 TUBD1Q9UJT1 453 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 KIAA1257Q9ULG3 409 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 RNF215Q9Y6U7 377 aa5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 NIPBLQ6KC79 2804 aaeCLIP5.23□□□□□ -1.57
TUBGCP4-209ENST00000564511 COL27A1Q8IZC6 1860 aaPredicted RBP5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 SYNJ2BP-COX16A0A087WUM0 186 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 A1L4Q6 167 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 STMND1H3BQB6 276 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 K7ERQ8 282 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 M0QYV0 167 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 NEMP1O14524 444 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 SMAD6O43541 496 aaKnown RBP5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 KLRC4O43908 158 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 CUTAO60888 179 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 ENDOD1O94919 500 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 FBXO21O94952 628 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 TRUB2O95900 331 aaKnown RBP5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 NAT2P11245 290 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 ADRB3P13945 408 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 ATF4P18848 351 aaPredicted RBP5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 SYT1P21579 422 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 RRM1P23921 792 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 CD82P27701 267 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 GTF2H1P32780 548 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 THBS2P35442 1172 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 PSMC2P35998 433 aaKnown RBP5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 RECQLP46063 649 aaPredicted RBP5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 MXI1P50539 228 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 NEK3P51956 506 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 MLLT10P55197 1068 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 PFN3P60673 137 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 KRT83P78385 493 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 PPARDQ03181 441 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 ADAM9Q13443 819 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 CUL2Q13617 745 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 PTK2BQ14289 1009 aa5.22□□□□□ -1.57
TUBGCP4-209ENST00000564511 ELOCQ15369 112 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms