RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 C2CD4BA6NLJ0 364 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 WASH4PA8MWX3 477 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SNX2O60749 519 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 LRCH4O75427 683 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SORBS2O94875 1100 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 HEXIM1O94992 359 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 ASMTLO95671 621 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 EML2O95834 649 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 LDLRP01130 860 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 MMEP08473 750 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 CYP2A6P11509 494 aaPredicted RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 VARSP26640 1264 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 VIPR1P32241 457 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 PTPN9P43378 593 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 MTIF2P46199 727 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SEPHS1P49903 392 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 PAPOLAP51003 745 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 NOMO3P69849 1222 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 CHAF1BQ13112 559 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 LRP8Q14114 963 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 PYCR3Q53H96 274 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 Q6ZVL8 140 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 HSD11B1LQ7Z5J1 315 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 NOP9Q86U38 636 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SLC9B2Q86UD5 537 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 TRIM74Q86UV6 250 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 PLXDC1Q8IUK5 500 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 LZTR1Q8N653 840 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 CT55Q8WUE5 264 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 CENPIQ92674 756 aaPredicted RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 DTD2Q96FN9 168 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 TIGD1Q96MW7 591 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 OR6C1Q96RD1 312 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 C11orf70Q9BRQ4 267 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 TBC1D10AQ9BXI6 508 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SP110Q9HB58 689 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 PDFQ9HBH1 243 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SIDT1Q9NXL6 827 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 CNOT8Q9UFF9 292 aaKnown RBP7.27□□□□□ -1.25
VPS4A-203ENST00000564399 ZNHIT2Q9UHR6 403 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 SLC5A6Q9Y289 635 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 MTORP42345 2549 aa7.27□□□□□ -1.25
VPS4A-203ENST00000564399 FER1L5A0AVI2 2057 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 TTC24A2A3L6 582 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 WIPF3A6NGB9 483 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 TRAFD1O14545 582 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 DPM1O60762 260 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 RASSF9O75901 435 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 RECKO95980 971 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 CPP00450 1065 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 MT-ND3P03897 115 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 ANKRD34CP0C6C1 535 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 KRT3P12035 628 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 SLC2A4P14672 509 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 AMD1P17707 334 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 GPD1P21695 349 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 TEAD1P28347 426 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 GARSP41250 739 aaKnown RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 LEPRP48357 1165 aaKnown RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 RENBPP51606 427 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 NDST2P52849 883 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 EPHA4P54764 986 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 GFERP55789 205 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 TPI1P60174 286 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 AP1S1P61966 158 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 SH3BP2P78314 561 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 NSUN2Q08J23 767 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 IL11RAQ14626 422 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 NR6A1Q15406 480 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 CHRNA6Q15825 494 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 CPZQ66K79 652 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 JMJD6Q6NYC1 403 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 IYDQ6PHW0 289 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 CHST15Q7LFX5 561 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 TTC13Q8NBP0 860 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 THAP4Q8WY91 577 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 SEC14L1Q92503 715 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 AP2M1Q96CW1 435 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 SCARF2Q96GP6 870 aaPredicted RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 C9orf72Q96LT7 481 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 TGM7Q96PF1 710 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 SLC39A8Q9C0K1 460 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 ING2Q9H160 280 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 EPB41L1Q9H4G0 881 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 ACTL8Q9H568 366 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 LRRC19Q9H756 370 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 LHX9Q9NQ69 397 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 CD84Q9UIB8 345 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 G3BP2Q9UN86 482 aaKnown RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 PRKAB1Q9Y478 270 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 ZNF451Q9Y4E5 1061 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 PCDHGC4Q9Y5F7 938 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 PCDHGA9Q9Y5G4 932 aaKnown RBP7.26□□□□□ -1.25
VPS4A-203ENST00000564399 PCDHGA6Q9Y5G7 932 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 PCNX1Q96RV3 2341 aa7.26□□□□□ -1.25
VPS4A-203ENST00000564399 APCP25054 2843 aa7.25□□□□□ -1.25
VPS4A-203ENST00000564399 A0A1W2PQ67 120 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms