RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 MARK2Q7KZI7 788 aaKnown RBP30.57■■■□□ 2.48
CMTM4-204ENST00000563952 PROSER1Q86XN7 944 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 CDKL3Q8IVW4 592 aaPredicted RBP30.57■■■□□ 2.48
CMTM4-204ENST00000563952 CACTIN-AS1Q8N1I8 211 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 EID2BQ96D98 161 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 NXPE2Q96DL1 559 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 OXNAD1Q96HP4 312 aaPredicted RBP30.57■■■□□ 2.48
CMTM4-204ENST00000563952 DEPDC7Q96QD5 511 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 FCRL5Q96RD9 977 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 CCDC3Q9BQI4 270 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 FERMT1Q9BQL6 677 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 DPEP2Q9H4A9 486 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 SYNDIG1Q9H7V2 258 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 GPSM3Q9Y4H4 160 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 ADGRG1Q9Y653 693 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 CAPN6Q9Y6Q1 641 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 ASXL3Q9C0F0 2248 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 RGSL1A5PLK6 1076 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 SRRM3A6NNA2 597 aaPredicted RBP30.56■■■□□ 2.48
CMTM4-204ENST00000563952 TAF4O00268 1085 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 IVLP07476 585 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 HENMT1Q5T8I9 393 aaKnown RBP30.56■■■□□ 2.48
CMTM4-204ENST00000563952 ALS2CLQ60I27 953 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 DARS2Q6PI48 645 aaKnown RBP30.56■■■□□ 2.48
CMTM4-204ENST00000563952 SLC25A41Q8N5S1 370 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 GPBAR1Q8TDU6 330 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 CCDC74AQ96AQ1 378 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 GSDMCQ9BYG8 508 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 TRNAU1APQ9NX07 287 aaKnown RBP30.56■■■□□ 2.48
CMTM4-204ENST00000563952 AK5Q9Y6K8 562 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 KNTC1P50748 2209 aa30.56■■■□□ 2.48
CMTM4-204ENST00000563952 FADS2P1A8MWK0 482 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 KRT37O76014 449 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 ASMTLO95671 621 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 RBP3P10745 1247 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 SFTPA2Q8IWL1 248 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 IPMKQ8NFU5 416 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 COX14Q96I36 57 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 GUCA1BQ9UMX6 200 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 PCDHB1Q9Y5F3 818 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 SPO11Q9Y5K1 396 aa30.55■■■□□ 2.48
CMTM4-204ENST00000563952 KMT2BQ9UMN6 2715 aaPredicted RBP30.55■■■□□ 2.48
CMTM4-204ENST00000563952 RP1P56715 2156 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 DDX3YO15523 660 aaKnown RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 CSO75390 466 aaKnown RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 ATP1A1P05023 1023 aaKnown RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 AK4P27144 223 aaPredicted RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 ADCY8P40145 1251 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 TMC3Q7Z5M5 1100 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 NRROSQ86YC3 692 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 RNF10Q8N5U6 811 aaKnown RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 GPR156Q8NFN8 814 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 MRGPRX2Q96LB1 330 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 OR2M4Q96R27 311 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 SPATA16Q9BXB7 569 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 TSGA10Q9BZW7 698 aa30.54■■■□□ 2.48
CMTM4-204ENST00000563952 SPATS2LQ9NUQ6 558 aaKnown RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 CNOT6Q9ULM6 557 aaKnown RBP30.54■■■□□ 2.48
CMTM4-204ENST00000563952 CACNA1BQ00975 2339 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 LOC285095A0A1B0GVY8 99 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 CASC3O15234 703 aaKnown RBP30.53■■■□□ 2.48
CMTM4-204ENST00000563952 KCNN4O15554 427 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 NOBOXO60393 691 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 CTBSQ01459 385 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 MPP3Q13368 585 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 SIRPB2Q5JXA9 342 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 ITPRIPL1Q6GPH6 555 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 OGFOD3Q6PK18 319 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 SLC30A9Q6PML9 568 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 GPR26Q8NDV2 337 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 SCARF2Q96GP6 870 aaPredicted RBP30.53■■■□□ 2.48
CMTM4-204ENST00000563952 SRPK1Q96SB4 655 aaKnown RBP30.53■■■□□ 2.48
CMTM4-204ENST00000563952 NRSN2Q9GZP1 204 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 CDH19Q9H159 772 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 GBA3Q9H227 469 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 RABGEF1Q9UJ41 708 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 PLEKHM1Q9Y4G2 1056 aa30.53■■■□□ 2.48
CMTM4-204ENST00000563952 OAS3Q9Y6K5 1087 aaKnown RBP30.53■■■□□ 2.48
CMTM4-204ENST00000563952 AURKAO14965 403 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 ARHGAP6O43182 974 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 STK10O94804 968 aaKnown RBP30.52■■■□□ 2.48
CMTM4-204ENST00000563952 CHRNA4P43681 627 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 GALNT13Q8IUC8 556 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 CCDC112Q8NEF3 446 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 FSD1LQ9BXM9 530 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 RAD18Q9NS91 495 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 TAAR2Q9P1P5 351 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 DKK4Q9UBT3 224 aa30.52■■■□□ 2.48
CMTM4-204ENST00000563952 GOLGA6L9A6NEM1 432 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 KRT86O43790 486 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 EPOP01588 193 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 C14orf28Q4W4Y0 310 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 PYCR3Q53H96 274 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 RBM44Q6ZP01 1051 aaKnown RBP30.51■■■□□ 2.47
CMTM4-204ENST00000563952 OR6C4Q8NGE1 309 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 ZDHHC1Q8WTX9 485 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 HES6Q96HZ4 224 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 BPIFA1Q9NP55 256 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 ZNHIT2Q9UHR6 403 aa30.51■■■□□ 2.47
CMTM4-204ENST00000563952 ST14Q9Y5Y6 855 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms